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Table 2 Top 20 abundant proteins in cultured H. hongdechloris detected using TMT methods

From: Genome and proteome of the chlorophyll f-producing cyanobacterium Halomicronema hongdechloris: adaptative proteomic shifts under different light conditions

Gene id and Protein names

Gene names

GO groups

NSAF

XM38_016410 C-phycocyanin alpha chain

cpcA

C

2.102094144

XM38_010860 Allophycocyanin beta chain

apcB

C

1.776656472

XM38_010840 Phycobiliprotein ApcE

apcE1

C

1.680191234

XM38_010810 Photosystem II CP43 reaction center protein

psbC

C

1.620297982

XM38_033090 Allophycocyanin beta chain

apcB

C

1.578160694

XM38_016420 Phycocyanin-Beta subunit

cpcB

C

1.512437125

XM38_048950 hypothetical protein (no response to light changes)

 

N/A

1.422597247

XM38_043620 ATP synthase subunit beta

atpD

C

1.371714484

XM38_011320 Ribulose bisphosphate carboxylase large chain

rcaL

C/G

1.309966131

XM38_006390 60 kDa chaperonin (groL1)

groL1

J

1.300160599

XM38_033070 Phycobiliprotein ApcE

apcE2

C

1.27127403

XM38_010880 Photosystem II manganese-stabilizing polypeptide

psbO

C

1.159967986

XM38_024350 60 kDa chaperonin (groL2)

groL2

J

1.089474158

XM38_033080 Allophycocyanin alpha subunit

apcA

C

1.071718194

XM38_016390 Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod

cpcC

C

1.024015604

XM38_009060 Elongation factor Tu

tuf

J

1.020570417

XM38_043770 Chaperone protein dnaK2

dnaK2

K

0.996454107

XM38_010800 Photosystem II CP47 reaction center protein

psbB

C

0.990623791

XM38_052610 Aliphatic amidase expression-regulating protein

amiC

N/A

0.902904028

XM38_031350 Transketolase

tkt2

C/G

0.858646625

  1. C = energy production and conversion; G = carbohydrate transport and metabolism; J = translation, ribosomal structure and biogenesis; K = transcription; O = posttranslational modification, protein turnover, chaperones; N/A = not assigned
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BMC Genomics

ISSN: 1471-2164

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