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Table 2 Thirty-six differentially expressed genes involved in motility and chemotaxis in wt1.2/wt0.3

From: Differential expression profiling of ΔlitR and ΔrpoQ mutants reveals insight into QS regulation of motility, adhesion and biofilm formation in Aliivibrio salmonicida

VSAL_ID

FC

p-adjusted

Gene

Function

VSAL_I0799

−2.55

3.1217E-13

 

methyl-accepting chemotaxis protein

VSAL_I1822

−2.42

9.1448E-06

 

methyl-accepting chemotaxis protein

VSAL_I1863

−2.15

1.9114E-07

motY

sodium-type flagellar protein MotY precursor

VSAL_I2117

−2.26

4.7375E-06

 

methyl-accepting chemotaxis protein

VSAL_I2193

−2.96

1.4728E-16

 

methyl-accepting chemotaxis protein

VSAL_I2293

−2.18

9.8803E-11

flhA

polar flagellar assembly protein FlhA

VSAL_I2295

−2.23

1.0662E-10

flhB

polar flagellar assembly protein FlhB

VSAL_I2298

−2.17

2.498E-07

flip

polar flagellar assembly protein FliP

VSAL_I2299

−2.18

9.0124E-10

fliO

polar flagellar assembly protein FliO

VSAL_I2300

−2.11

3.8699E-09

fliN

polar flagellar switch protein FliN

VSAL_I2301

−2.02

2.1524E-08

fliM

polar flagellar motor switch protein FliM

VSAL_I2302

−2.27

1.8061E-10

fliL

polar flagellar protein FliL

VSAL_I2303

−2.05

9.5905E-09

fliK

polar flagellar hook-length control protein FliK

VSAL_I2304

−2.15

1.6591E-06

fliJ

polar flagellar assembly protein FliJ

VSAL_I2305

−2.12

2.5798E-07

fliI

polar flagellum-specific ATP synthase FliI

VSAL_I2306

−2.66

2.9148E-17

fliH

polar flagellar assembly protein FliH

VSAL_I2307

−2.61

5.6929E-15

fliG

polar flagellar motor switch protein FliG

VSAL_I2308

−2.73

7.0985E-17

fliF

polar flagellar M-ring protein FliF (pseudogene)

VSAL_I2309

−2.63

7.3748E-15

fliE

flagellar hook-basal body complex protein FliE

VSAL_I2313

−2.13

4.8203E-13

fliS

polar flagellar protein FliS

VSAL_I2314

−2.09

3.7432E-07

flaI

polar flagellar protein FlaI

VSAL_I2316

−2.06

3.2548E-06

flaG

polar flagellar protein FlaG (pseudogene)

VSAL_I2319

−2.68

1.6171E-16

flaC

flagellin subunit C

VSAL_I2327

−2.20

1.314E-05

flaA

flagellin subunit A

VSAL_I2328

−2.21

1.353E-08

flgL

flagellar hook-associated protein type 3 FlgL

VSAL_I2329

−2.33

3.2437E-10

flgK

hypothetical protein

VSAL_I2330

−2.14

5.0777E-09

flgJ

peptidoglycan hydrolase FlgJ

VSAL_I2335

−2.02

1.3131E-05

flgE

flagellar hook protein FlgE

VSAL_I2336

−2.13

1.3871E-10

flgD

flagellar basal-body rod protein FlgD

VSAL_I2337

−2.20

1.5834E-09

flgC

flagellar basal-body rod protein FlgC

VSAL_I2338

−2.29

8.8397E-09

flgB

flagellar basal-body rod protein FlgB

VSAL_I2517

−2.51

3.4203E-14

flaF

flagellin subunit F

VSAL_I2897

−2.40

6.0326E-09

fliL

putative flagellar basal body-associated protein FliL

VSAL_II0675

−2.38

0.00023876

 

methyl-accepting chemotaxis protein

VSAL_II0712

−3.87

8.4405E-30

 

methyl-accepting chemotaxis citrate transducer

VSAL_II1022

−2.60

8.1567E-05

 

methyl-accepting chemotaxis protein