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Fig. 1 | BMC Genomics

Fig. 1

From: Comparative transcriptome analyses revealed different heat stress responses in high- and low-GS Brassica alboglabra sprouts

Fig. 1

RNA-seq data qualification in HG and LG sprouts at 25 °C and 42 °C. a Multi-dimensional scaling (MDS) plot of RNA-seq expression profiles in two dimensions. The MDS plot shows clustering of samples based on the distance derived from biological coefficient of variation (BCV) between the paired samples. T01, T02 and T03 represent HG1, HG2 and HG3; T04, T05 and T06 represent HGT1, HGT2 and HGT3; T07, T08 and T09 represent LG1, LG2 and LG3; T10, T11 and T12 represent LGT1, LGT2 and LGT3, respectively. b The boxplot of overall expression levels of lines HG and LG at 25 °C and 42 °C with three biological replications, respectively. The y-axis displays the log10 (FPKM) of every sample. c Pairwise comparison of whole gene expression levels of lines HG and LG at 25 °C and 42 °C with three biological replications. d Venn diagram showing the number of DEGs in HG vs HGT, HG vs LG, LG vs LGT and HGT vs LGT, respectively

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BMC Genomics

ISSN: 1471-2164

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