Table 4 Summary statistics for the raw sequencing data, before and after filtering reads. “Coverage depth” was calculated based on the estimated assembled genome size (300 Mb)
Insert Size | Pair reads Length (bp) | Raw | After Filter | ||
|---|---|---|---|---|---|
Total Data (G) | Sequence coverage (X) | Total Data (G) | Sequence coverage (X) | ||
170 bp | 100 bp | 22.68 | 45.36 | 20.96 | 41.93 |
500 bp | 100 bp | 8.54 | 17.08 | 7.34 | 14.69 |
800 bp | 100 bp | 8.84 | 17.69 | 5.14 | 10.29 |
2 kb | 100 bp | 13.23 | 26.46 | 7.05 | 14.10 |
5 kb | 100 bp | 14.51 | 29.02 | 4.74 | 9.49 |
10 kb | 100 bp | 11.77 | 23.53 | 5.51 | 11.02 |
20 kb | 100 bp | 20.40 | 40.81 | 2.91 | 5.81 |
Total | – | 99.97 | 199.95 | 53.66 | 107.32 |