Table 1 Newly sequenced genome assemblies and annotations. Kombucha strains were isolated from 3 separate fermentations by the same producer. (1) sequence reported in [10]
Strains | Assemblies | Annotation | Isolation | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
Length (bp) | Contigs | N50 | L50 | GC % | CDS | fCDS | Country | Type/Region | Year | |
UBOCC-A-315001 | 1,876,981 | 1 | 1,876,981 | 1 | 37.73 | 1858 | 47 | France | Kombucha - Brittany - green tea ferment day 0 (biofilm) | 2013 |
UBOCC-A-315002 | 1,821,972 | 160 | 29,861 | 15 | 38.05 | 1841 | 39 | France | Kombucha - Brittany - black tea ferment starter (biofilm) | 2014 |
UBOCC-A-315003 | 1,870,064 | 14 | 219,792 | 4 | 37.69 | 1923 | 21 | France | Kombucha - Brittany - black tea ferment day 8 (liquid) | 2014 |
UBOCC-A-315004 | 1,872,260 | 82 | 49,629 | 11 | 37.71 | 1904 | 83 | France | Kombucha - Brittany - green tea ferment day 2 (liquid) | 2014 |
UBOCC-A-315005 | 1,870,799 | 13 | 286,569 | 3 | 37.69 | 1917 | 18 | France | Kombucha - Brittany - green tea ferment day 0 (liquid) | 2013 |
CRBO_1381 | 1,834,577 | 1 | 1,834,577 | 1 | 37.81 | 1859 | 62 | France | Cider - Normandy | 1993 |
CRBO_1384 | 1,825,193 | 104 | 39,866 | 14 | 37.8 | 1917 | 41 | France | Cider - Calvados | 2008 |
CRBO_1386 | 1,788,970 | 43 | 124,72 | 6 | 37.79 | 1830 | 44 | France | Cider - Normandy | 1993 |
CRBO_1389 | 1,902,472 | 39 | 143,611 | 6 | 37.64 | 1932 | 70 | France | Cider - Mayenne | 2008 |
CRBO_1391 | 1,922,334 | 146 | 38,303 | 17 | 37.62 | 2004 | 46 | France | Cider - Mayenne | 2008 |
CRBO_1395 | 1,867,409 | 30 | 141,686 | 5 | 37.68 | 1902 | 34 | France | Cider - Mayenne | 2008 |
CRBO_13106 | 1,841,703 | 87 | 47,896 | 11 | 37.72 | 1910 | 35 | Spain | Cider - Asturias | 2006 |
CRBO_13108 | 1,885,467 | 41 | 126,048 | 5 | 37.7 | 1936 | 57 | France | Cider - Normandy | 2008 |
CRBO_13120 | 1,860,062 | 182 | 19,393 | 25 | 37.78 | 1981 | 74 | France | Cider - Calvados | 2008 |
PSU-1(1) | 1,780,517 | 1 | 1,780,517 | 1 | 37.89 | 1859 | 159 | – | – | – |