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Table 1 List of 67 named barley PUB genes with their classification, genome locus, and the number of matching ESTs from libraries categorized as originated from either abiotic- or biotic stress conditions or from vegetative or generative tissue

From: Classification of barley U-box E3 ligases and their expression patterns in response to drought and pathogen stresses

Class Name Gene ID Chromosome position No. EST from library conditions
    Abiotic Biotic Generative Vegetative
stresses
I HvPUB1 HORVU7Hr1G108540 chr7H:625630612–625,636,687 3   18 14
IIa HvPUB2 HORVU0Hr1G020210 chrUn:105982242–105,985,875 14   4 3
IIa HvPUB3 HORVU1Hr1G069990 chr1H:487882055–487,884,794 25   16 7
IIa HvPUB4 HORVU2Hr1G068080 chr2H:478112149–478,116,380    2  
IIa HvPUB5 HORVU2Hr1G084670 chr2H:612532269–612,544,059     
IIa HvPUB6 HORVU2Hr1G107270 chr2H:711398163–711,399,326 2   8 3
IIa HvPUB7 HORVU3Hr1G081300 chr3H:594390155–594,392,901 8    2
IIa HvPUB9 HORVU3Hr1G113910 chr3H:689573848–689,580,280 8 1 2 11
IIa HvPUB10 HORVU4Hr1G059610 chr4H:497914351–497,923,545 7 1 8 10
IIa HvPUB11 HORVU5Hr1G021270 chr5H:102370756–102,375,777 20 2 22 12
IIa HvPUB12 HORVU5Hr1G021280 chr5H:102438361–102,442,824 19 2 15 10
IIa HvPUB13 HORVU5Hr1G059280 chr5H:463207931–463,210,666 69   2 4
IIa HvPUB14 HORVU6Hr1G069010 chr6H:478128962–478,134,602 6   14 6
IIa HvPUB15 HORVU6Hr1G072420 chr6H:503270970–503,276,564 9   6  
IIa HvPUB16 HORVU6Hr1G073280 chr6H:507756329–507,760,902 18   13 9
IIa HvPUB17 HORVU7Hr1G000780 chr7H:1309283–1,315,775 8 1 6 14
IIa HvPUB18 HORVU7Hr1G047920 chr7H:162626044–162,632,315     
IIa HvPUB19 HORVU7Hr1G061800 chr7H:290933777–290,936,462 10   3  
IIa HvPUB20 HORVU7Hr1G121810 chr7H:654539257–654,541,940    3 2
IIa HvPUB21 HORVU6Hr1G041430 chr6H:228200647–228,211,681 10   8 25
IIb HvPUB22 HORVU2Hr1G067610 chr2H:473427629–473,435,416     
IIb HvPUB24 HORVU3Hr1G083500 chr3H:603823686–603,825,481 2   2 4
IIb HvPUB25 HORVU5Hr1G029950 chr5H:183287072–183,291,627 19 1 13 32
IIb HvPUB26 HORVU5Hr1G059910 chr5H:467836849–467,839,703 2   2  
IIb HvPUB28 HORVU7Hr1G039760 chr7H:105941903–105,943,737 5   2  
IIb HvPUB29 HORVU7Hr1G040790 chr7H:111351005–111,354,169 3 1 3 2
IIb HvPUB57 HORVU6Hr1G066870 chr6H:463530777–463,532,567     
IIb HvPUB60 HORVU6Hr1G095130 chr6H:583093713–583,097,921 9    
III HvPUB31 HORVU4Hr1G070330 chr4H:574972338–574,976,289     2
IV HvPUB32 HORVU1Hr1G053270 chr1H:393963164–393,967,064 1   3 1
IV HvPUB33 HORVU2Hr1G013130 chr2H:28662118–28,667,022 6    1
IV HvPUB34 HORVU4Hr1G017550 chr4H:78074992–78,084,602 2 1 2 1
IV HvPUB35 HORVU4Hr1G088650 chr4H:640685328–640,696,684   1 1 5
IV HvPUB36 HORVU5Hr1G060580 chr5H:474627227–474,645,070 6    2
IV HvPUB37 HORVU5Hr1G077700 chr5H:553639844–553,654,837     1
IV HvPUB38 HORVU6Hr1G003590 chr6H:8039677–8,048,008    1  
IV HvPUB39 HORVU6Hr1G039290 chr6H:203742583–203,750,519     
IV HvPUB40 HORVU6Hr1G064130 chr6H:433376429–433,381,410   1   2
IV HvPUB41 HORVU7Hr1G018750 chr7H:25113620–25,118,764 2   1 7
IV HvPUB42 HORVU7Hr1G086580 chr7H:522444326–522,451,758 14   11 22
V HvPUB8 HORVU3Hr1G089040 chr3H:627083327–627,148,340 17   7 14
V HvPUB23 HORVU4Hr1G064070 chr4H:536981409–536,983,117 11 1   
V HvPUB27 HORVU6Hr1G077120 chr6H:528582237–528,584,114   4 2 6
V HvPUB30 HORVU7Hr1G046920 chr7H:155292351–155,294,342 6   2 6
V HvPUB43 HORVU2Hr1G104640 chr2H:704314927–704,319,431 1   1  
V HvPUB44 HORVU3Hr1G095960 chr3H:651507615–651,508,824     
V HvPUB45 HORVU5Hr1G005830 chr5H:9430272–9,431,296     
V HvPUB46 HORVU5Hr1G081160 chr5H:563433753–563,438,456     
V HvPUB47 HORVU7Hr1G093780 chr7H:572254844–572,256,019     2
V HvPUB48 HORVU0Hr1G003810 chrUn:17443362–17,445,805 13    8
V HvPUB49 HORVU1Hr1G074180 chr1H:507187193–507,189,384 2    6
V HvPUB50 HORVU2Hr1G074130 chr2H:535102978–535,105,576 10   10 12
V HvPUB51 HORVU2Hr1G076470 chr2H:550697966–550,699,310     
V HvPUB52 HORVU2Hr1G105720 chr2H:707375224–707,377,465 2    5
V HvPUB53 HORVU2Hr1G123130 chr2H:754722899–754,723,432 1    
V HvPUB54 HORVU4Hr1G066070 chr4H:550510764–550,513,664 2   21 13
V HvPUB55 HORVU6Hr1G034250 chr6H:159856080–159,857,826    2  
V HvPUB56 HORVU6Hr1G065480 chr6H:450926585–450,933,083 4   2  
V HvPUB58 HORVU6Hr1G089560 chr6H:570052386–570,053,961 19    
V HvPUB59 HORVU6Hr1G089590 chr6H:570107770–570,109,318 14    
V HvPUB61 HORVU7Hr1G073100 chr7H:412252306–412,361,703 2    4
VI HvPUB62 HORVU1Hr1G039050 chr1H:272999682–273,010,309 19   20 5
VI HvPUB63 HORVU3Hr1G052520 chr3H:381485236–381,496,734 7   2  
VI HvPUB64 HORVU4Hr1G083960 chr4H:627004063–627,010,259    10 1
VII HvPUB65 HORVU1Hr1G002240 chr1H:4416074–4,418,966 4 1 1 10
VII HvPUB66 HORVU7Hr1G076230 chr7H:445084899–445,090,758 7   11 3
X HvPUB67 HORVU4Hr1G022990 chr4H:122902796–122,907,027 9   8 8