Skip to main content

Table 1 sequence feature of each mitochondrial genome

From: Mitochondrial genome and transcriptome analysis of five alloplasmic male-sterile lines in Brassica juncea

Cytoplasm Brassica oxyrrhina Diplotaxis berthautii Diplotaxis catholica Diplotaxis erucoides Moricandia arvensis
GenBank accession MG872825 MG872826 MG872827 MG872828 MG872829
length (Kb) 225.667 240.012 221.926 240.083 256.592
GC (%) 45.28 45.00 45.22 45.00 45.18
rRNAs 3 3 3 3 3
tRNAs 22 23 23 23 23
protein genes 32 32 31 32 32
Rate of coding gene (%) 16.41 15.46 16.50 15.45 14.46
Rate of intron region (%) 12.52 11.80 12.42 11.81 11.02
Rate of intergenic spacers (%) 71.07 72.74 71.07 72.74 74.52
Number of large repeats (≥1 kb) 0 1 1 1 1
Number of medium repeats (100–1000 bp) 22 33 20 29 21
Number of small repeats (< 100 bp) 96 119 121 115 180
Number of tandem repeats 20 21 18 23 32
Rate of repeat sequence (%) 3.74 6.09 7.04 6.13 8.53
Rate of Chloroplast sequence (%) 3.68 3.55 3.93 3.55 3.49
Rate of Nuclear TE sequence (%) 17.13 17.35 16.44 17.34 16.61