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Table 5 Gene ontology terms overrepresented among differentially expressed genes in liver

From: A comparative analysis of the transcriptome profiles of liver and muscle tissue in pigs divergent for feed efficiency

Term Count B-H p-values
GO terms overrepresented among DEGs with higher expression in the LRFI group vs HRFI group
 GO:0022613~ribonucleoprotein complex biogenesis 35 2.25E-04
 GO:0006396~RNA processing 53 2.29E-04
 GO:0051607~defense response to virus 22 5.93E-04
 GO:0060337~type I interferon signalling pathway 13 5.99E-04
 GO:0034097~response to cytokine 45 0.001367
 GO:0016070~RNA metabolic process 161 0.004935
 GO:0046395~carboxylic acid catabolic process 18 0.005979
 GO:0006952~defense response 67 5.93E-04
 GO:0055088~lipid homeostasis 14 0.007424
 GO:0010628~positive regulation of gene expression 71 0.012472
GO terms overrepresented among DEGs with lower expression in the LRFI group vs HRFI group
 GO:0007166~cell surface receptor signalling pathway 120 1.86E-06
 GO:0030198~extracellular matrix organisation 32 1.91E-06
 GO:0043062~extracellular structure organisation 32 1.37E-06
 GO:0022610~biological adhesion 85 4.48E-06
 GO:0007155~cell adhesion 84 6.60E-06
 GO:2000026~regulation of multicellular organismal development 78 6.00E-04