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Fig. 4 | BMC Genomics

Fig. 4

From: Differential expression of innate and adaptive immune genes in the survivors of three gibel carp gynogenetic clones after herpesvirus challenge

Fig. 4

Commonly up-regulated DEUs from s-H vs c-H, s-F vs c-F and s-A+ vs c-A+. a Venn diagram of up- or down-regulated DEUs from s-A+ vs c-A+ (green circle), s-F vs c-F (blue circle) and s-H vs c-H (red circle). b The qPCR analyses of eight genes (sptb, urod, cpox, fech, blvrb, hba, mfrn1 and fam210b) related to circulatory system in head kidney of gibel carp clone A+, F and H. eef1a1l1 was used as the normalizer. Gene expression levels are relative to that of clone A+ control individuals. Each bar represents mean ± standard deviation (SD) (n = 3). Asterisks indicate the significant differences between control and survivor (*: p < 0.05 and **: p < 0.05). c Heatmap of commonly up-regulated DEUs among s-H vs c-H, s-F vs c-F and s-A+ vs c-A+. Hierarchical clustering is calculated by log2 fold change values and the main clusters were lined out on the right

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