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Table 2 Cassava AQP duplicates identified in this study

From: Genome-wide comparison reveals divergence of cassava and rubber aquaporin family genes after the recent whole-genome duplication

Duplicated gene pair

Identity (%)

Ks

Ka/Ks

MePIP1;1/MePIP1;2

91.0

0.3169

0.0807

MePIP1;3/MePIP1;4

93.5

0.2442

0.0546

MePIP2;1/MePIP2;2

91.0

0.3260

0.0876

MePIP2;3/MePIP2;4

88.2

0.4224

0.1089

MePIP2;5/MePIP2;6

89.3

0.5591

0.0258

MePIP2;7/MePIP2;8

91.9

0.3106

0.0703

MeTIP1;1/MeTIP1;2

89.7

0.4090

0.0699

MeTIP1;3/MeTIP1;4

90.3

0.2952

0.1555

MeTIP1;5/MeTIP1;6

86.7

0.5756

0.0646

MeTIP2;2/MeTIP2;3

88.6

0.4055

0.0898

MeTIP3;1/MeTIP3;2

90.5

0.3015

0.1214

MeNIP1;1/MeNIP1;2

83.3

0.3958

0.2888

MeNIP3;2/MeNIP3;3

81.7

0.4731

0.2702

MeXIP3;1/MeXIP3;2

89.8

0.1877

0.3751

  1. Ks and Ka were calculated using PAML. (Ka nonsynonymous substitution rate, Ks synonymous substitution rate)
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BMC Genomics

ISSN: 1471-2164

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