Skip to main content

Table 8 Sequences of primers used in RT-qPCR

From: Development and evaluation of a milk protein transcript depletion method for differential transcriptome analysis in mammary gland tissue

Gene name

Gene accession number

Oligonucleotide name

Oligonucleotide sequence (5′-3′)

PAEP

NM_173929.3

LGB_F1

CAAGATCCCTGCGGTGTTCAAG

LGB_R1

ACTGTTCTCCATGCAGAAGAGC

LALBA

NM_174378.2

LALBA_F2

CAGTTTGCCTGAATGGGTCT

LALBA_R3

GATCATCATCCAGGAACTTGTC

CSN1S2

NM_174528.2

CSN1S2_F2

CACCAGTGAGGAAAATTCAAAG

CSN1S2_R1

GCTGATAAACAGTCTTGAGATAC

CSN1S1

NM_181029.2

CSN1S1_F4

GTGCTGAGGAACGACTTCACAG

CSN1S1_R4A

CAGTGTATTGTGTGCCTAGTGG

CSN3

NM_174294.2

CSN3_F5

GCCCACCTGAGATCAACACAG

CSN3_R5

AGGAGACGAGGAAGGAGCCAG

CSN2

XM_010806178.1

CSN2_F1

TGAGGAACAGCAGCAAACAG

CSN2_R1

ACAGGGGTTTGAGTAAGAGG

RPS15A

NM_001037443.1

RPS15A_F1

CCGTGCTCCAAAGTCATCGTC

RPS15A_R1

TGAAACCAAACTGACGGGATG

CCL20

NM_174263.2

CCL20_F3

CAGCAAGTCAGAAGCAAGCAA

CCL20_R1

CCCACTTCTTCTTTGGATCTGC

IL6

NM_173923.2

IL6_F1

GGAGGAAAAGGACGGATGCT

IL6_R1

GGTCAGTGTTTGTGGCTGGA

PPP1CC

NM_174581.2

PPP1CC_F1

TCGACAGCATCATCCAACG

PPP1CC_R1

CGGGAAACCACCGTACTCA