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Fig. 6 | BMC Genomics

Fig. 6

From: A single-cell transcriptomic atlas of the developing chicken limb

Fig. 6

Transcriptional modules and sub-populations in skeletogenic cells (a-c) Contour density plot of tSNE projection for each sample. Partial tSNE plot on top, to visualize only cells belonging to skeletogenic sub-clusters (Color-coding and numbering according to Fig. 2b). Same color / shade across samples indicates comparable cell populations. d-e Gene co-expression modules (d) Turquoise and (e) Red. Representation of the Turquoise module only shows the 50 genes with the top membership, of a total of 215. f Top 5 GO-terms, from analysis of the genes member of modules Turquoise and Red. g-h Averaged module activities visualized as heatmaps on stage HH29 tSNE plots corresponding to the modules Turquoise and Red. i Expression heatmap of GDF5 visualized on stage HH29 tSNE

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