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Fig. 1 | BMC Genomics

Fig. 1

From: From reference genomes to population genomics: comparing three reference-aligned reduced-representation sequencing pipelines in two wildlife species

Fig. 1

Overview of methods used in this study to process reduced representation sequencing data with reference genomes, with some alternatives to software used indicated where appropriate. * Reproducibility filtering only possible if replicates or technical replicates are performed. ** Possible sex-linked SNP filter requires knowledge of sex of samples and is based on XX/XY system, but could be reversed for ZZ/ZW systems

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