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Table 1 Statistics for Illumina transcriptomic sequencing of Pfu. mantle edge tissues

From: Comparative transcriptomic and proteomic analysis of yellow shell and black shell pearl oysters, Pinctada fucata martensii

Feature

Number

Ratio

Total Number of Unigenes

56,969

–

N50 Length of Unigenes

1004

–

All Annotated

21,610

Annotated ratio 37.9%

Clean Reads num. of T01

35,164,932

Mapped Reads Ratio 80.96%

Clean Reads num. of T02

28,132,519

Mapped Reads Ratio 77.09%

All DEGs (T02/T01) (| log2 (fold change) | ≥ 2 and false discovery rate < 0.001)

up-regulated 385 down-regulated 227

–

  1. T01 = mantle edges of black shell pearl oyster (B); T02 = mantle edges of yellow shell pearl oyster (Y)