Table 2 Selected DEGs in Pfu. edge mantle tissues
GeneID | Nr/ Swissprot annotation | FDR | log2FC | Significant or not | qPCR validation |
|---|---|---|---|---|---|
c50039.graph_c0 | nacre protein [Pinctada fucata] | 2.22E-16 | 6.446008706 | up, yes | down |
c62280.graph_c0 | nacre protein (N16.3) [Pinctada fucata] | 2.08E-13 | 3.357226519 | up, yes | up |
c70362.graph_c0 | nacre protein [Pinctada fucata] | 6.97E-06 | 2.154265848 | up, yes | up |
c56018.graph_c0 | RecName: Full = Uncharacterized shell protein 12 [Pinctada margaritifera] | 1.95E-05 | 2.221337962 | up, yes | up |
c61883.graph_c0 | RecName: Full = Uncharacterized shell protein 1; [Pinctada margaritifera] | 4.61E-07 | 2.475769919 | up, yes | up |
c68187.graph_c0 | RecName: Full = Shell matrix protein, partial [Mytilus californianus] | 0 | 4.11289221 | up, yes | down |
c45445.graph_c0 | mantle gene 6 [Pinctada fucata] | 3.08E-05 | −3.177947326 | down, yes | up |
c55873.graph_c0 | mantle protein 12 [Pinctada fucata] | 1.05E-07 | −2.845558652 | down, yes | up |
c59543.graph_c0 | mantle gene 1 [Pinctada fucata] | 0 | −3.904743757 | down, yes | up |
c77975.graph_c1 | mantle gene 4 [Pinctada fucata] | 0 | −4.001364161 | down, yes | down |
c50108.graph_c0 | calmodulin, partial [Paracyclopina nana] | 9.34E-05 | 2.025942795 | up, yes | up |
c66278.graph_c0 | Calmodulin [Crassostrea gigas] | 1.98E-05 | −2.130307651 | down, yes | down |
c72378.graph_c0 | putative calmodulin [Schistosoma mansoni] | 0.996557005 | 0.302184851 | up, no | up |
c64073.graph_c0 | Astacin [Crassostrea gigas] | 0 | 4.97505774 | up, yes | up |
c73606.graph_c0 | Putative tyrosinase-like protein tyr-3 [Crassostrea gigas] | 0 | 5.148959225 | down, yes | up |
c76659.graph_c1 | Sulfide: quinone oxidoreductase, mitochondrial [Crassostrea gigas] | 4.63E-11 | −2.626911255 | down, yes | down |
c66049.graph_c0 | cellular retinoic acid/retinol binding protein [Metapenaeus ensis] | 1.07E-05 | −2.382034648 | down, yes | down |
c75964.graph_c0 | K07424 cytochrome P450, family 3, subfamily A [EC:1.14.14.1] | 0.005094036 | −1.489849812 | down, no | down |