From: Mapping gastrointestinal gene expression patterns in wild primates and humans via fecal RNA-seq
Samples | Groups | Number of paired-end reads | Remaining reads after quality filtering | Singletons | Low quality reads | Low quality (%) | Total reads aligned using Kallisto | Ratio OLIGO:RIBO | Alignment (%) |
---|---|---|---|---|---|---|---|---|---|
KOTO-OLIGO | Haman | 13,796,106 | 13,340,097 | 0 | 456,009 | 3.31 | 59,616 | 9.13 | 0.45 |
KOTO-RIBO | Human | 14,066,624 | 13,695,055 | 0 | 371,569 | 2.64 | 6532 | 0.05 | |
MBUSA-OLIGO | Human | 16,559,894 | 14,492,534 | 1,269,002 | 798,358 | 4.82 | 103,239 | 11.85 | 0.71 |
MBUSA-RIBO | Human | 16,775,019 | 15,644,483 | 845,112 | 285,424 | 1.70 | 8714 | 0.06 | |
IYIKI-OLIGO | Human | 4,992,286 | 4,390,932 | 437,374 | 163,980 | 3.28 | 57,579 | 7.41 | 1.31 |
IYIKI-RIBO | Human | 5,677,816 | 5,159,806 | 388,422 | 129,588 | 2.28 | 7772 | 0.15 | |
MALUI-OLIGO | Gorilla | 4,541,457 | 4,086,161 | 334,319 | 120,977 | 2.66 | 57,810 | 5.02 | 1.41 |
MALUI-RIBO | Gorilla | 4,749,986 | 4,193,129 | 418,094 | 138,763 | 2.92 | 11,506 | 0.27 |