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Table 2 Number of the identified CAZyme-encoding genes involved in breakdown of plant cell wall lignocellulose components in the genomes of the studied phlebioid fungi

From: Genome description of Phlebia radiata 79 with comparative genomics analysis on lignocellulose decomposition machinery of phlebioid fungi

Cellulose active

P. radiata

P. brevispora

P. centrifuga

B. adusta

P. gigantea

P. carnosa

P. chrysosporium

GH1

2

2

2

2

2

2

2

GH3

10

8

7

9

9

11

10

GH5_5

4

4

2

4

4

6

2

GH5_22

2

2

2

2

2

2

2

GH6

1

1

1

1

1

1

1

GH7

6

4

3

5

5

5

8

GH9

1

1

1

1

1

1

1

GH12

2

2

2

2

3

3

2

GH44

1

2

1

0

0

0

0

GH45

3

3

1

1

1

1

2

GH131

2

4

2

3

2

2

3

Hemicellulose active

 CE1

2

1

1

1

2

3

4

 CE5

0

1

0

0

0

0

0

 CE15

2

2

6

2

1

3

2

 CE16

10

8

6

15

6

5

7

 GH2

3

2

3

3

3

2

2

 GH5_7

3

2

3

2

2

2

3

 GH10

7

8

6

4

4

5

6

 GH11

1

0

0

0

2

1

1

 GH27

2

2

2

3

3

3

3

 GH29

1

1

1

0

0

0

0

 GH31

4

5

6

4

6

8

6

 GH35

3

4

3

4

2

4

3

 GH43

2

2

2

6

7

4

4

 GH51

1

1

4

2

2

2

2

 GH74

2

1

1

2

2

2

4

 GH95

1

3

1

1

0

1

1

 GH115

1

2

2

2

1

1

1

Pectin active

 CE8

2

3

1

2

4

2

2

 CE12

0

0

0

1

1

0

0

 GH28

7

5

5

6

10

4

5

 GH53

1

1

1

1

1

1

1

 GH78

2

1

2

2

1

1

1

 GH88

1

1

1

1

1

1

1

 GH105

3

0

2

1

0

0

0

 PL1

0

0

0

1

0

0

0

 PL4

1

1

1

1

0

0

0

Auxiliary redox enzymes

 AA1

7

11

6

2

5

10

5

 AA2

10

15

8

21

9

11

15

 AA3

32

39

23

39

23

36

38

 AA3_1 (CDH)

1

1

1

1

1

1

1

 AA5

10

8

6

7

6

6

7

 AA9

12

12

11

28

15

11

16

 AA14

3

2

2

3

3

2

2

 DyP

1

3

2

10

4

1

0

 HTP

5

2

4

4

4

3

3

  1. CAZy GH, CE, PL and AA classes, dye-decolorizing peroxidases (DyP), and heme-thiolate peroxidases (HTP) are indicated
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BMC Genomics

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