Genome description of Phlebia radiata 79 with comparative genomics analysis on lignocellulose decomposition machinery of phlebioid fungi

Table 7 Summary of the SSP candidates of P. radiata that fulfilled the three criteria used in the analyses

Protein coding gene ID	Length	Number of cysteines	EffectorP^a	LOCALIZER^b
minus.g2681	265	10	0.610	NLS
minus.g6180	200	6	0.669	0.998, C
plus.g1485	119	11	0.916	NLS
plus.g2909	150	8	0.676	0.998, C
plus.g2957	146	8	0.570	0.896, C
plus.g7370	229	19	0.767	0.716, C
plus.g8107	158	8	0.747	0.971, C; 0.824, M
plus.g881	179	4	0.781	0.993, C; 0.995, M

^aThe number is the probability of being an effector given by EffectorP
^bThe number is the probability of having a Chloroplast (C) transit peptide-like or Mitochondria (M) transit peptide-like sequences given by LOCALIZER; for the cases of searching for nuclear localization signals (NLS), no probability was returned

ISSN: 1471-2164