A high density SLAF-seq SNP genetic map and QTL for seed size, oil and protein content in upland cotton

BMC Genomics

Table 1 Characteristics of the genetic map

Linkage	Total	Total	Average	Gap	Segregation
Group ID	Marker	Distance (cM)	Distance (cM)	< 5 cM(%)	distortion
chrA01	644	144.59	0.22	99.69%	3
chrA02	613	130.01	0.21	99.84%	33
chrA03	189	115.47	0.61	97.34%	31
chrA04	217	169.35	0.78	93.85%	7
chrA05	313	128.33	0.41	98.08%	7
chrA06	180	113.43	0.63	98.32%	1
chrA07	252	113.8	0.45	98.41%	0
chrA08	232	108.79	0.47	98.27%	0
chrA09	235	128.88	0.55	97.86%	6
chrA10	340	247.25	0.73	95.18%	3
chrA11	110	105.76	0.96	96.33%	2
chrA12	267	149.43	0.56	98.87%	32
chrA13	703	175	0.25	99.15%	1
At	4295	1830.09	0.43	98.05%	126
chrD01	266	118.54	0.45	99.25%	30
chrD02	178	122.29	0.69	97.18%	15
chrD03	170	193.56	1.14	93.62%	0
chrD04	150	83.06	0.55	99.33%	0
chrD05	235	229.75	0.98	94.29%	26
chrD06	109	93.05	0.85	96.30%	82
chrD07	223	97.26	0.44	98.65%	0
chrD08	109	100.47	0.92	97.22%	0
chrD09	159	128.66	0.81	97.47%	13
chrD10	415	151.51	0.37	98.79%	24
chrD11	263	97.01	0.37	98.85%	0
chrD12	206	107.39	0.52	98.54%	0
chrD13	255	128.69	0.5	98.43%	61
Dt	2738	1651.24	0.6	97.71%	251
Total	7033	3481.33	0.49	98.50%	377

ISSN: 1471-2164