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Table 1 Genes with GO term “transcription from RNA polymerase II promoter” are enriched in SGP DEGs

From: mRNA profiling reveals significant transcriptional differences between a multipotent progenitor and its differentiated sister

Genea

Description

C16C10.4

Probable histone deacetylase complex subunit SAP18

C29F9.5

Histone acetyltransferase; ortholog of human EP300

ceh-2

Homeobox protein; homolog of EMX1/2

ceh-40

Homeobox protein; homolog of Exd/Pbx

cog-1

Homeobox protein; homolog of Nkx6

duxl-1

Homeobox protein; related to dual homeobox Like

efl-3

E2F-like (Mammalian transcription factor)

hda-1

Histone DeAcetylase 1

hda-11

Histone DeAcetylase 11

hda-3

Histone DeAcetylase 1

mxl-2

Ortholog of human MLX

mys-4

MYST family histone acetyltransferase; NuA4 complex

nfya-1

DNA binding protein; homolog of human NFYA

nfyc-1

DNA binding protein; homolog of human NFYC

sir-2.3

NAD-dependent deacetylase

swsn-5

SWI/SNF chromatin remodeling complex component

T26A8.4

Ortholog of transcription/RNA degradation factor Caf120

zip-2

bZIP transcription factor family

zip-4

bZIP transcription factor family; related to human CEBPs

ZK1067.2

Zinc finger protein; homolog of human ZNFX1

  1. aSelected genes from this category, including transcription factors in wTF2.0 [54] and chromatin regulators. All genes are listed in Additional file 3