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Table 1 Several selection regions and candidate genes with previous evidences across four groups including North, Northwest, Southwest and South groups

From: Genome-wide scan reveals genetic divergence and diverse adaptive selection in Chinese local cattle

Chr Start End Group Candidate Gene References
2 126,079,431 126,252,390 Northwest PPP1R8 [34]
5 48,838,857 49,040,943 North; Northwest; Southwest; South WIF1 [3]
5 57,490,826 57,729,851 Northwest; Southwest; South CDK2; DGKA; IKZF4 PMEL; RAB5B; RPS26; SUOX [36]
6 38,917,456 39,220,461 North LCORL [27]
7 4,529,302 4,762,339 Northwest; Southwest ELL, FKBP8, GDF15; ISYNA1 LRRC25; SSBP4 [35]
7 47,559,314 47,821,784 North; Southwest SAR1B [30]
7 49,826,844 49,997,049 North; Northwest SPOCK1 [3]
7 51,476,325 51,727,698 North; Northwest; Southwest; South HSPA9 [30]
7 52,240,425 52,499,466 North; Northwest; Southwest; South UBE2D2 [33]
7 53,107,671 53,401,992 North; Northwest; Southwest HBEGF [32]
8 60,334,817 60,589,007 Northwest; Southwest NPR2 [4]
12 29,083,909 29,372,191 Southwest; South RXFP2 [34]
13 49,457,188 49,707,937 Southwest BMP2 [25]
14 1,549,928 1,901,893 Northwest; Southwest; South DGAT1 [30]
14 24,769,617 25,001,051 Northwest; Southwest LYN; TGS1; RPS20 [25]
16 44,291,131 44,636,778 North; Northwest; Southwest NMNAT1 [30]
16 44,639,909 44,883,644 North; Northwest; Southwest PIK3CD; TMEM201 [35]
16 73,481,886 73,711,818 South LPGAT1 [28]
18 14,408,694 14,697,775 Northwest CPNE7; FANCA; SPG7 [25]