Table 2 Average LD decay distance estimated for each chromosome and sub-genome
Chromosome | Minor Allele Frequency | ||
|---|---|---|---|
Sub-genome A | ≥ 0.05 | ≥ 0.1 | ≥ 0.2 |
1 | 5.07 | 25.82 | 71.09 |
2 | 2.38 | 4.99 | 17.14 |
3 | 1.80 | 5.08 | 18.94 |
4 | 9.67 | 27.99 | 41.06 |
5 | 3.55 | 8.41 | 34.32 |
6 | 1.79 | 4.10 | 17.97 |
7 | 2.34 | 8.49 | 16.82 |
8 | 1.66 | 4.24 | 19.97 |
9 | 3.93 | 17.31 | 77.74 |
10 | 5.50 | 13.96 | 67.16 |
Average | 3.77 | 12.04 | 38.22 |
Sub-genome B | |||
11 | 5.95 | 24.13 | 98.31 |
12 | 1.41 | 4.03 | 42.65 |
13 | 1.54 | 4.03 | 25.84 |
14 | 4.18 | 18.74 | 75.79 |
15 | 3.09 | 8.14 | 62.11 |
16 | 2.36 | 5.70 | 48.67 |
17 | 3.26 | 9.86 | 91.70 |
18 | 3.51 | 9.32 | 57.06 |
19 | 5.77 | 18.49 | 52.59 |
20 | 6.75 | 16.72 | 98.13 |
Average | 3.78 | 11.92 | 65.29 |
Genome-wide Average | 3.78 | 11.98 | 51.75 |