Genome-wide profiling of the alternative splicing provides insights into development in Plutella xylostella

Zhao, Qian; Zhong, Weimin; He, Weiyi; Li, Yiying; Li, Yaqing; Li, Tianpu; Vasseur, Liette; You, Minsheng

doi:10.1186/s12864-019-5838-3

BMC Genomics

Table 5 Go annotation of specific proteins with significantly high expression patterns at larval stages and differentially between males and females

From: Genome-wide profiling of the alternative splicing provides insights into development in Plutella xylostella

GO ID	Functional description	P value	FDR
Proteins with specific expression patterns in larvae stages
Cellular Component
GO:0009331	Glycerol-3-phosphate dehydrogenase complex	0.003500	0.041700
GO:1990204	Oxidoreductase complex	0.012500	0.074800
Molecular Function
GO:0004252	Serine-type endopeptidase activity	0.000005	0.000118
GO:0008236	Serine-type peptidase activity	0.000010	0.000118
GO:0017171	Serine hydrolase activity	0.000010	0.000118
GO:0004175	Endopeptidase activity	0.000058	0.000533
GO:0070011	Peptidase activity, acting on L-amino acid peptides	0.000311	0.002300
Biological Process
GO:0006508	Proteolysis	0.000540	0.015665
GO:0071704	Organic substance metabolic process	0.001703	0.019009
GO:0008152	Metabolic process	0.001966	0.019009
GO:0005975	Carbohydrate metabolic process	0.003261	0.020091
GO:0046168	Glycerol-3-phosphate catabolic process	0.003464	0.020091
Proteins with different AS events and expression patterns between males and females
Cellular Component
GO:0043234	Protein complex	0.005020	0.153015
GO:0031981	Nuclear lumen	0.007547	0.153015
GO:0098796	Transcription elongation factor complex	0.009963	0.153015
GO:0034702	Organelle lumen	0.012343	0.153015
GO:0034703	intracellular organelle lumen	0.012343	0.153015
Molecular Function
GO:0005524	ATP binding	0.010270	0.116441
GO:0016773	phosphotransferase activity, alcohol group as acceptor	0.000154	0.010854
GO:0005344	Oxygen transporter activity	0.004442	0.100065
GO:0001883	Purine nucleoside binding	0.016417	0.119449
GO:0022890	Inorganic cation transmembrane transporter activity	0.038358	0.165173
Biological Process
GO:0006464	Cellular protein modification process	0.000382	0.030106
GO:0006812	Cation transports	0.000519	0.030106
GO:0006468	Protein phosphorylation	0.000578	0.030106
GO:0006811	Ion transport	0.010780	0.030106
GO:0042278	Purine nucleoside metabolic process	0.024593	0.220958

Only p value < 0.05 are listed. FDR False discovery rate. For each of the functions, at most 5 GO terms are listed. The GO terms are all detailed in Additional file 5: Table S4

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ISSN: 1471-2164

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