BMC Genomics

Table 3 Performance of subcellular localization predictors on MP1289

From: Benchmarking subcellular localization and variant tolerance predictors on membrane proteins

	BUSCA	CELLO	DeepLoc 1.0	LocTree3	MultiLoc2	SubCons	WolfPSORT
TP	316	348	447	344	108	242	516
FP	112	158	102	75	50	42	218
TN	763	1073	987	1203	1144	1152	1071
FN	724	875	838	942	998	610	773
Sensitivity	0.36	0.28	0.41	0.27	0.09	0.2	0.4
Specificity	0.87	0.87	0.91	0.94	0.96	0.96	0.83
PPV	0.74	0.69	0.81	0.82	0.68	0.85	0.7
NPV	0.51	0.55	0.54	0.56	0.53	0.65	0.58
ACC	0.56	0.58	0.6	0.6	0.54	0.68	0.62
MCC	0.21	0.19	0.3	0.28	0.11	0.35	0.26
OPM	0.23	0.21	0.28	0.26	0.18	0.3	0.25

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ISSN: 1471-2164

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