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Table 10 Differentially expressed candidate genes involved in food intake control and seasonality

From: Arctic charr brain transcriptome strongly affected by summer seasonal growth but only subtly by feed deprivation

   

T1_Fed vs T0

T1_FDP vs T0

T1_FDP vs T1_Fed

Gene Name

ContigID

Accession No.

LOG FC

P value

LOG FC

P value

LOG FC

P value

Apelin receptor A

Fishapp_brain_apja.2.3

NM_001140368.1

0.99

0.003

–

–

–

–

Cocaine and amphetamine regulated transcript

Fishapp_brain_contig_33002

NM_001146680.1

−0.66

< 0.001

−0.33

0.006

–

–

Cholecystokinin

Fishapp_brain_contig_18503

NM_001139522.1

–

–

–

–

–

–

 

Fishapp_brain_contig_21023

 

–

–

–

–

–

–

 

Fishapp_brain_contig_17948

 

–

–

−0.37

0.003

–

–

Corticotropin-releasing factor

Fishapp_brain_contig_16188

NM_001124627.1

–

–

− 0.55

0.008

–

–

Deiodinase 2b

Fishapp_brain_contig_18436

NM_001124268.1

−0.60

0.003

−1.79

< 0.001

−1.19

< 0.001

 

Fishapp_brain_contig_15175

 

−1.21

> 0.001

−2.02

< 0.001

−0.81

< 0.001

Insulin like growth factor 1

Fishapp_brain_IGF1

GU933431.1

–

–

−0.81

0.003

–

–

Leptin

Fishapp_brain_lepb1

JX131305.1

1.701

< 0.001

1.37

< 0.001

–

–

Neuropeptide Y

Fishapp_brain_npy

NM_001146681.1

−0.55

< 0.001

–

–

–

–

Proopiomelanocortin

Fishapp_brain_contig_04399

XM_024143555.1

–

–

5.99

0.001

–

–

Tachykinin 1

Fishapp_brain_contig_09262

XM_023974799.1

–

–

−0.51

0.002

–

–

  1. Genes found in the transcriptome, but no difference in expression:
  2. Apelin, Agouti related peptide, Arginine vasotocin, Galanin, Melanin concentrating hormone, Peptide YY, Thyroid releasing hormone
  3. Genes searched, but not present in the transcriptome:
  4. Ghrelin, Kisspeptin, Leptin receptor, Melanocortin receptor 4, Obestatin, Octadecaneuropeptide, Orexin, Pituitary adenylate cyclase-activating polypeptide, Prolactin releasing peptide, Secretoneurin