Table 4 Exemplified tissue-specific MTIs in different tissues
From: Construction and analysis of degradome-dependent microRNA regulatory networks in soybean
Category | miRNA | Target | miRNA_seq | Tissue | miRNA_type | Target_Annotation |
|---|---|---|---|---|---|---|
Cat_1 | gma-miR159b-3p | Glyma.04G125700 | ATTGGAGTGAAGGGAGCTCCA | Cotyledon | non-changed | myb domain protein 33 |
Cat_1 | gma-miR159e-3p | Glyma.06G312900 | TTTGGATTGAAGGGAGCTCTA | Cotyledon | Leaf-specific | myb domain protein 65 |
Cat_1 | gma-miR159e-3p | Glyma.04G125700 | TTTGGATTGAAGGGAGCTCTA | Cotyledon | Leaf-specific | myb domain protein 33 |
Cat_1 | gma-miR159a-3p | Glyma.06G312900 | TTTGGATTGAAGGGAGCTCTA | Cotyledon | Leaf-specific | myb domain protein 65 |
Cat_1 | gma-miR159c | Glyma.04G125700 | ATTGGAGTGAAGGGAGCTCCG | Cotyledon | non-changed | myb domain protein 33 |
Cat_1 | gma-miR159f-3p | Glyma.06G312900 | ATTGGAGTGAAGGGAGCTCCA | Cotyledon | non-changed | myb domain protein 65 |
Cat_1 | gma-miR1508c | Glyma.09G256500 | TAGAAAGGGAAATAGCAGTTG | Leaf | non-changed | Pentatricopeptide repeat (PPR) superfamily protein |
Cat_1 | gma-miR1508c | Glyma.16G139800 | TAGAAAGGGAAATAGCAGTTG | Leaf | non-changed | Tetratricopeptide repeat (TPR)-like superfamily protein |
Cat_1 | gma-miR1508c | Glyma.16G165400 | TAGAAAGGGAAATAGCAGTTG | Leaf | non-changed | Tetratricopeptide repeat (TPR)-like superfamily protein |
Cat_1 | gma-miR1508c | Glyma.12G118300 | TAGAAAGGGAAATAGCAGTTG | Leaf | non-changed | ATP binding;nucleic acid binding;helicases |
Cat_1 | gma-miR1508c | Glyma.16G162800 | TAGAAAGGGAAATAGCAGTTG | Leaf | non-changed | rna processing factor 2 |
Cat_1 | gma-miR1508c | Glyma.09G256600 | TAGAAAGGGAAATAGCAGTTG | Leaf | non-changed | Pentatricopeptide repeat (PPR) superfamily protein |
Cat_1 | gma-miR5674b | Glyma.09G171200 | TAATTGTGTTGTACATTATCA | Leaf | non-changed | ATP binding;nucleic acid binding;helicases |
Cat_1 | gma-miR1508c | Glyma.16G160700 | TAGAAAGGGAAATAGCAGTTG | Leaf | non-changed | rna processing factor 2 |
Cat_1 | gma-miR1508c | Glyma.16G162700 | TAGAAAGGGAAATAGCAGTTG | Leaf | non-changed | rna processing factor 2 |
Cat_1 | gma-miR1508c | Glyma.16G162000 | TAGAAAGGGAAATAGCAGTTG | Leaf | non-changed | Pentatricopeptide repeat (PPR) superfamily protein |
Cat_1 | gma-miR5674a | Glyma.09G171200 | TAATTGTGTTGTACATTATCA | Leaf | non-changed | ATP binding;nucleic acid binding;helicases |
Cat_1 | gma-miR2109-5p | Glyma.16G085900 | TGCGAGTGTCTTCGCCTCTG | Root | non-changed | Disease resistance protein (TIR-NBS-LRR class) family |
Cat_1 | gma-miR1510b-3p | Glyma.U008300 | TGTTGTTTTACCTATTCCACC | Root | non-changed | Disease resistance protein (TIR-NBS-LRR class) family |
Cat_1 | gma-miR1510b-3p | Glyma.16G118600 | TGTTGTTTTACCTATTCCACC | Root | non-changed | disease resistance protein (TIR-NBS-LRR class), putative |
Cat_1 | gma-miR164e | Glyma.12G226500 | TGGAGAAGCAGGGCACGTGCA | Seed | non-changed | NAC domain transcriptional regulator superfamily protein |
Cat_1 | gma-miR164e | Glyma.06G236000 | TGGAGAAGCAGGGCACGTGCA | Seed | non-changed | NAC domain transcriptional regulator superfamily protein |
Cat_1 | gma-miR164a | Glyma.13G274300 | TGGAGAAGCAGGGCACGTGCA | Seed | non-changed | NAC domain transcriptional regulator superfamily protein |
Cat_1 | gma-miR164c | Glyma.06G236000 | TGGAGAAGCAGGGCACGTGC | Seed | non-changed | NAC domain transcriptional regulator superfamily protein |
Cat_1 | gma-miR164c | Glyma.12G161700 | TGGAGAAGCAGGGCACGTGC | Seed | non-changed | NAC domain transcriptional regulator superfamily protein |
Cat_1 | gma-miR164k | Glyma.12G226500 | TGGAGAAGCAGGGCACGTGCA | Seed | non-changed | NAC domain transcriptional regulator superfamily protein |