Table 1 Statistical summary of RNA-Seq on Echiniscoides cf. sigismundi and Richtersius cf. coronifer (data from BGI)
From: Comparative transcriptomics suggest unique molecular adaptations within tardigrade lineages
Echiniscoides cf. sigismundi | Richtersius cf. coronifer | |
|---|---|---|
Total Bases | 5,531,945,800 | 5,761,908,600 |
Number of raw reads | 58,601,018 | 64,000,000 |
Number of clean reads | 55,319,458 | 57,619,086 |
GC% | 34.73% | 47.40% |
Q20 | 97.54% | 96.63% |
Number of contigs | 55,499 | 84,106 |
Mean length of contigs (bp) | 450 | 454 |
N50contigs | 1176 | 1259 |
Number of Unigenes | 31,601 | 55,053 |
Mean length of Unigenes | 830 | 1052 |
N50Unigenes | 1524 | 2197 |
Number of Unigenes > 1 kb | 9974 | 20,319 |
Number of Unigenes > 3 kb | 1068 | 4589 |
FPKMmean / (min-max) | 27.3587/(0.0–44,747.82) | 13.4950/(0.0–14,668.10) |
FPKMmedian | 4.6156 | 2.1674 |
FPKMsum | 864,563.2158 | 742,939.1452 |
TPMmean / (min-max) | 31.6446 (0–51,757.72) | 18.1643 (0–19,743.35) |
TPMmedian | 5.3387 | 2.9173 |
Number of Unigenes after filteringa | 15,784 | 21,384 |
Mean length of Unigenes after filtering | 1175 | 1160 |