Table 3 Summary of resistance to each antibiotic tested. The genes associated with a given resistance profile, as well as the number of susceptible (S) or resistant (R) isolates, are shown. For ciprofloxacin resistance, we also show mutations on gyrA/B and parC/E genes
| Â | # resistant isolates | # susceptible isolates | Associated resistance gene (number of genes) | gene:mutation:number of isolates with mutations |
|---|---|---|---|---|
Ampicillin | 38 | 35 | bla-tem-1 (40) | Not applicable |
Ceftriaxone | 1 | 72 | bla-ctx-m-15 (1) | Not applicable |
Ciprofloxacin | 59 | 14 | qnrS1 (7) | gyrA:S83Y:29 |
gyrA:S83F:28 | ||||
gyrA:D87G:2 | ||||
gyrA:D87N:3 | ||||
gyrA:N529S:6 | ||||
gyrA:D538N:52 | ||||
gyrB:S464F:9 | ||||
parC:S80I:1 | ||||
parC:S80E:1 | ||||
parC:E84K:2 | ||||
parE:S339 L:1 | ||||
parE:A364V:7 | ||||
parE:L416F:1 | ||||
Chloramphenicol | 39 | 34 | catA1 (39) | Not applicable |
Cotrimoxazole | 35 | 38 | sul1 (39); sul2 (36); dfrA7 (40) | Not applicable |