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Table 5 Motif sequences for HMAs identified by MEME analysis

From: The genome-wide impact of cadmium on microRNA and mRNA expression in contrasting Cd responsive wheat genotypes

Motif

Width

Multilevel consensus sequence

1

50

LNLBGYJHVRATKVGSNSALAKIVRLVEEAQMSKAPVQRLADKVAKYFVP

2

41

TPTAVMVATGVGARRGVLIKGGDVLESLANIKAIAFDKTGT

3

50

VGDVIKVLPGEKVPVDGVVVDGRSHVBESMLTGESAPVAKZVGSEVIGGT

4

50

AIGSGTAVAIEAADVVLMSNBLEDVPTAIDLSRKTFRTIRQNYVWAVAYN

5

41

KFFEESGMJVFFFLLGKYLEVLAKGKASDAMSKLMELAPET

6

29

ELQKRGGPVAMVGDGINDAPALAAADVGM

7

50

IVGIPVAAGALFPFTGFRLPPWLAGACMAFSSVSVVCSSLLLRLYKKPRH

8

26

SMGIKSVMLTGDNWAAAQAVAKZVGI

9

29

ELLYLVASAESNSEHPLAKAIVEYAQSFS

10

29

EEVADFEILPGEGVYAEIDGKKVLVGNKR

  1. Motif numbers corresponded to the motifs in Additional file 2: Figure S8