Transcriptome analysis of virulence-differentiated Fusarium oxysporum f. sp. cucumerinum isolates during cucumber colonisation reveals pathogenicity profiles

Table 3 DEGs annotated with function of transposition

GeneID	InVir 0 h vs 24 h			InVir 0 h vs 120 h			WT 0 h vs 24 h			WT 0 h vs 120 h			Blast nr	BP
GeneID	log₂ Ratio	R ^a	P ^b	log₂ Ratio	R	P	log₂ Ratio	R	P	log₂ Ratio	R	P	Blast nr	BP
CL1911. Contig2_All	3.54	Up	0.8	4.52	Up	0.8	2.57	Up	0.8	4.06	Up	0.8	transposase-like protein	–
CL1809. Contig3_All	8.35	Up	0.7	9.24	Up	0.8	10.12	Up	0.9	8.8	Up	0.8	transposase	DNA integration
CL119. Contig2_All	4.1	Up	0.8	3.96	Up	0.8	6.07	Up	0.8	6.12	Up	0.8	restless-like transposase	–
CL1911. Contig1_All	3.73	Up	0.8	3.69	Up	0.8	1.34	Up	0.7	2.63	Up	0.8	transposase-like	–
CL126. Contig4_All	−1.65	Down	0.6	−1.9	Down	0.6	−9.11	Down	0.8	−3.47	Down	0.7	putative transposase	–
CL730. Contig6_All	−0.83	Down	0.5	−2.47	Down	0.7	−0.7	Down	0.5	−9.65	Down	0.9	transposase	–
Unigene 13826_All	2.07	Up	0.6	7	Up	0.9	−3.42	Down	0.3	7.51	Up	0.9	retrotransposase	DNA integration
CL361. Contig32_All	9.88	Up	0.9	9.38	Up	0.9	−6.01	Down	0.5	2.42	Up	0.6	transposase	–
Unigene 14252_All	10.02	Up	0.9	7.31	Up	0.6	−5.4	Down	0.4	−5.37	Down	0.4	transposase	–
CL2135. Contig4_All	10.3	Up	0.9	6.83	Up	0.6	−6.77	Down	0.6	2.93	Up	0.7	restless-like transposase	–
Unigene 1211_All	−4.12	Down	0.3	5.76	Up	0.9	−5.06	Down	0.4	5.66	Up	0.8	retrotransposase	DNA integration

ISSN: 1471-2164