Table 2 Number of genes that were upregulated, i.e., had a positive log fold change of expression with q < 0.15 (UP), experienced no significant change in expression (NO), or were downregulated (DO) after exposure to EE2. At hatching the q threshold was set to q < 0.25, see text and Additional file 1: Figure S5
| Â | Males UP | Males NO | Males DO | Total |
|---|---|---|---|---|
a) Embryos | ||||
 Females UP | 0 | 7 | 0 | 7 |
 Females NO | 149 | 37.599 | 233 | 37.981 |
 Females DO | 0 | 7 | 1 | 8 |
 Total | 149 | 37,613 | 234 | 37,996 |
b) Hatchlings | ||||
 Females UP | 267 | 9,987 | 3,588 | 13,842 |
 Females NO | 1,275 | 8,040 | 977 | 10,292 |
 Females DO | 4,341 | 9,073 | 234 | 13,648 |
 Total | 5,883 | 27,100 | 4,799 | 37,782 |
c) Juveniles | ||||
 Females UP | 3 | 6,090 | 0 | 6,093 |
 Females NO | 1 | 27,733 | 0 | 27,734 |
 Females DO | 0 | 3884 | 0 | 3,884 |
 Total | 4 | 37,707 | 0 | 37,711 |