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Table 2 Statistics on the used datasets of PPINs

From: A seed-extended algorithm for detecting protein complexes based on density and modularity with topological structure and GO annotations

SP

Name

N

E

D

Yeast

Krogan-Core

2708

7123

0.00194

 

DIP

4930

17201

0.00141

 

combined6

4671

20461

0.00187

Homo Sapiens

DIP

4615

6892

0.00064

 

HPRD+BioGRID

14398

139020

0.00134

Mus musculus

BioGRID

6142

16725

0.00088

  1. SP, the name of species; Name, the name of protein complex data set; N, the number of proteins; E, the number of interactions; D, the density of the PPI network
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BMC Genomics

ISSN: 1471-2164

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