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Table 2 For each site, sample size (“N”), mean expected heterozygosity over all loci (“He”) and standard deviation between loci, mean observed heterozygosity over all loci (“Ho”) and standard deviation between loci, mean allelic richness computed using a rarefaction approach over all loci (“Ar”), mean Fis over all loci (“Fis”), mean Fst over all loci (i.e. uniqueness at the site level; Fst = 1-HeSite/HeTotal)

From: Development of a large SNPs resource and a low-density SNP array for brown trout (Salmo trutta) population genetics

  SNPs Microsatellites
Site N Ho He Fis Fst Ar Ho He Fis Fst Ar
BEA-Rau 27 0.18 ± 0.19 0.18 ± 0.18 0.011 0.070 1.58 0.44 ± 0.20 0.58 ± 0.25 0.226 0.04 4.42
PON-Rau 12 0.22 ± 0.23 0.21 ± 0.20 −0.038 0.030 1.66 0.67 ± 0.19 0.70 ± 0.17 0.027 0.022 5.63
THA-Bar 26 0.22 ± 0.23 0.22 ± 0.20 −0.025 0.022 1.65 0.65 ± 0.17 0.67 ± 0.18 0.015 0.017 5.85
THA-Tcc 30 0.19 ± 0.20 0.20 ± 0.18 0.028 0.027 1.69 0.61 ± 0.18 0.69 ± 0.17 0.107 0.019 6.18
THA-Usi 29 0.22 ± 0.22 0.21 ± 0.19 −0.023 0.025 1.67 0.68 ± 0.12 0.73 ± 0.16 0.057 0.019 6.79
THA-Vig 21 0.21 ± 0.21 0.22 ± 0.20 0.056 0.028 1.68 0.64 ± 0.17 0.72 ± 0.12 0.125 0.024 6.40
VIG-Tex 22 0.21 ± 0.21 0.21 ± 0.19 −0.004 0.031 1.66 0.69 ± 0.14 0.70 ± 0.15 0.033 0.02 5.91