Table 4 Number of single-nucleotide variants (SNVs) obtained by mapping of mRNA-seq data from N. benthamiana and N. sylvestris against the Nb-1 reference genome sequence, considering only variants within coding exons
From: Genome and transcriptome characterization of the glycoengineered Nicotiana benthamiana line ΔXT/FT
Cov. Positions | SNVs | SNVs/Mbp | |
|---|---|---|---|
WT (AT) | 8,630,008 | 556 | 64 |
ΔXT/FT (AT) | 8,651,732 | 562 | 65 |
LAB (AU) | 11,483,694 | 789 | 69 |
N. benthamiana (CN) | 6,574,943 | 495 | 75 |
N. benthamiana (KR) | 10,517,109 | 695 | 66 |
N. benthamiana (SA) | 8,717,762 | 562 | 64 |
N. benthamiana (SE) | 11,074,510 | 719 | 65 |
N. sylvestris | 7,990,760 | 65,140 | 8,152 |