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Table 4 DEGs related to plant hormone signal transduction pathway during stem bending
| Gene ID | Putative function | Stage 2 vs Stage 0 | Stage 4 vs Stage 0 | ||
|---|---|---|---|---|---|
| FDR | log2FC | FDR | log2FC | ||
| Auxin signal transduction | |||||
| comp108122_c0 | auxin influx carrier protein (AUX1, LAX) | 8.61E-23 | −4.08 | 4.62E-57 | −6.79 |
| comp107506_c0 | auxin influx carrier protein (AUX1, LAX) | 1.02E-39 | −4.81 | 6.38E-106 | −5.10 |
| comp94670_c0 | auxin influx carrier protein (AUX1, LAX) | 7.49E-71 | −2.89 | 0.00E+ 00 | − 3.68 |
| comp99743_c0 | auxin-responsive protein AUX/IAA | 2.27E-43 | 2.36 | 3.60E-186 | 2.37 |
| comp99899_c0 | auxin-responsive protein AUX/IAA | 9.62E-114 | 4.00 | 2.37E-217 | 3.78 |
| comp87612_c0 | auxin-responsive protein AUX/IAA | 4.27E-06 | −2.87 | 8.83E-23 | −3.73 |
| comp74586_c0 | auxin-responsive protein AUX/IAA | 2.78E-05 | −2.37 | 8.94E-20 | −3.34 |
| comp87358_c0 | auxin-responsive protein AUX/IAA | 4.56E-26 | −2.73 | 5.16E-136 | −3.47 |
| comp89152_c0 | auxin-responsive protein AUX/IAA | 1.37E-44 | −2.50 | 6.35E-235 | −3.35 |
| comp65420_c0 | auxin-responsive protein AUX/IAA | 6.08E-32 | −2.71 | 1.90E-130 | −3.14 |
| comp99733_c0 | auxin-responsive protein AUX/IAA | 9.37E-40 | −2.10 | 7.74E-213 | −2.62 |
| comp66980_c0 | auxin-responsive protein AUX/IAA | 1.74E-26 | −3.15 | 3.50E-107 | −3.40 |
| comp83901_c0 | auxin-responsive protein AUX/IAA | 7.28E-08 | −3.20 | 6.12E-14 | −3.59 |
| comp32212_c0 | auxin-responsive protein AUX/IAA | 2.83E-23 | −3.33 | 8.97E-80 | −3.48 |
| comp85722_c0 | auxin response factor (ARF) | 2.89E-33 | 4.00 | 6.69E-114 | 4.95 |
| comp71781_c0 | auxin response factor (ARF) | 8.92E-10 | −2.21 | 3.63E-16 | −2.42 |
| comp89590_c0 | Auxin-responsive GH3 family protein (GH3) | 2.28E-22 | −2.32 | 1.83E-99 | −2.77 |
| comp77123_c0 | SAUR family protein | 1.88E-40 | 4.97 | 1.75E-75 | 4.91 |
| comp87079_c0 | SAUR family protein | 1.75E-32 | 2.05 | 2.33E-79 | 2.12 |
| comp97116_c0 | SAUR family protein | 1.32E-35 | −3.10 | 1.83E-179 | −3.39 |
| comp80117_c0 | SAUR family protein | 1.46E-25 | −5.52 | 4.12E-59 | −5.67 |
| comp84807_c0 | SAUR family protein | 5.24E-18 | −3.91 | 1.31E-42 | −5.54 |
| comp85286_c0 | SAUR family protein | 8.63E-17 | −3.06 | 2.49E-40 | −4.54 |
| comp47517_c0 | SAUR family protein | 1.31E-18 | −5.01 | 1.31E-38 | −4.70 |
| CTK signal transduction | |||||
| comp321451_c0 | cytokinin receptor (CRE1) | 4.14E-03 | −6.26 | 2.32E-06 | −6.69 |
| comp79050_c0 | type A response regulator (ARR-A) | 3.49E-12 | −3.32 | 1.89E-14 | −2.44 |
| comp36292_c0 | type A response regulator (ARR-A) | 2.68E-59 | −4.07 | 3.28E-169 | −4.00 |
| comp86047_c0 | type A response regulator (ARR-A) | 3.50E-05 | −2.48 | 1.48E-18 | −3.23 |
| comp107220_c0 | type A response regulator (ARR-A) | 1.48E-10 | −2.11 | 8.65E-45 | −2.47 |
| Gibberellin signal transduction | |||||
| comp94395_c0 | DELLA protein | 2.51E-07 | −2.32 | 1.61E-06 | −1.58 |
| comp34284_c0 | F-box protein GID2 | 3.10E-04 | 2.06 | 8.81E-13 | 2.57 |
| ABA signal transduction | |||||
| comp76549_c0 | abscisic acid receptor PYR/PYL family | 7.87E-12 | −1.06 | 6.93E-271 | −4.24 |
| comp112827_c0 | protein phosphatase 2C (PP2C) | 1.08E-05 | 7.17 | 4.00E-25 | 8.69 |
| comp69932_c0 | protein phosphatase 2C (PP2C) | 2.23E-06 | 5.36 | 3.53E-49 | 7.18 |
| comp82660_c0 | protein phosphatase 2C (PP2C) | 2.92E-07 | 0.89 | 1.97E-133 | 2.22 |
| comp126799_c0 | serine/threonine-protein kinase SAPK | 2.46E-02 | 5.98 | 5.70E-06 | 6.47 |
| comp117023_c0 | serine/threonine-protein kinase SAPK | 7.22E-02 | 2.77 | 2.79E-07 | 3.23 |
| Eth signal transduction | |||||
| comp94418_c0 | ethylene receptor (ETR) | 1.80E-27 | 1.83 | 8.21E-226 | 2.29 |
| comp61667_c0 | ethylene-responsive transcription factor (ERF) | 1.23E-87 | 4.02 | 0.00E+ 00 | 4.18 |
| comp32358_c0 | ethylene-responsive transcription factor (ERF) | 7.67E-18 | 1.82 | 2.16E-111 | 2.38 |
| comp85680_c0 | ethylene-responsive transcription factor (ERF) | 1.35E-30 | 2.23 | 2.85E-147 | 3.05 |
| comp74437_c0 | ethylene-responsive transcription factor (ERF) | 2.23E-02 | −1.41 | 5.41E-18 | −3.97 |
| comp80312_c0 | ethylene-responsive transcription factor (ERF) | 2.86E-24 | −2.68 | 2.30E-24 | −1.66 |
| comp55944_c0 | ethylene-responsive transcription factor (ERF) | 3.54E-17 | −6.27 | 4.06E-37 | −9.23 |
| comp191038_c0 | ethylene-responsive transcription factor (ERF) | 2.04E-07 | −2.17 | 1.32E-16 | −3.27 |
| comp69820_c0 | ethylene-responsive transcription factor (ERF) | 2.02E-09 | −5.35 | 2.84E-20 | − 5.31 |
| comp33734_c0 | ethylene-responsive transcription factor (ERF) | 3.87E-14 | −2.36 | 5.33E-95 | −5.77 |
| Brassinosteroid signal transduction | |||||
| comp119011_c0 | brassinosteroid resistant 1/2 | 2.03E-03 | −2.29 | 1.25E-02 | −1.35 |
| SA signal transduction | |||||
| comp80158_c0 | BZIP transcription factor family protein (TGA) | 7.98E-09 | −3.61 | 3.49E-15 | −3.34 |
