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Table 4 DEGs related to plant hormone signal transduction pathway during stem bending

From: Transcriptome profiling of Gerbera hybrida reveals that stem bending is caused by water stress and regulation of abscisic acid

Gene ID Putative function Stage 2 vs Stage 0 Stage 4 vs Stage 0
FDR log2FC FDR log2FC
Auxin signal transduction
 comp108122_c0 auxin influx carrier protein (AUX1, LAX) 8.61E-23 −4.08 4.62E-57 −6.79
 comp107506_c0 auxin influx carrier protein (AUX1, LAX) 1.02E-39 −4.81 6.38E-106 −5.10
 comp94670_c0 auxin influx carrier protein (AUX1, LAX) 7.49E-71 −2.89 0.00E+ 00 − 3.68
 comp99743_c0 auxin-responsive protein AUX/IAA 2.27E-43 2.36 3.60E-186 2.37
 comp99899_c0 auxin-responsive protein AUX/IAA 9.62E-114 4.00 2.37E-217 3.78
 comp87612_c0 auxin-responsive protein AUX/IAA 4.27E-06 −2.87 8.83E-23 −3.73
 comp74586_c0 auxin-responsive protein AUX/IAA 2.78E-05 −2.37 8.94E-20 −3.34
 comp87358_c0 auxin-responsive protein AUX/IAA 4.56E-26 −2.73 5.16E-136 −3.47
 comp89152_c0 auxin-responsive protein AUX/IAA 1.37E-44 −2.50 6.35E-235 −3.35
 comp65420_c0 auxin-responsive protein AUX/IAA 6.08E-32 −2.71 1.90E-130 −3.14
 comp99733_c0 auxin-responsive protein AUX/IAA 9.37E-40 −2.10 7.74E-213 −2.62
 comp66980_c0 auxin-responsive protein AUX/IAA 1.74E-26 −3.15 3.50E-107 −3.40
 comp83901_c0 auxin-responsive protein AUX/IAA 7.28E-08 −3.20 6.12E-14 −3.59
 comp32212_c0 auxin-responsive protein AUX/IAA 2.83E-23 −3.33 8.97E-80 −3.48
 comp85722_c0 auxin response factor (ARF) 2.89E-33 4.00 6.69E-114 4.95
 comp71781_c0 auxin response factor (ARF) 8.92E-10 −2.21 3.63E-16 −2.42
 comp89590_c0 Auxin-responsive GH3 family protein (GH3) 2.28E-22 −2.32 1.83E-99 −2.77
 comp77123_c0 SAUR family protein 1.88E-40 4.97 1.75E-75 4.91
 comp87079_c0 SAUR family protein 1.75E-32 2.05 2.33E-79 2.12
 comp97116_c0 SAUR family protein 1.32E-35 −3.10 1.83E-179 −3.39
 comp80117_c0 SAUR family protein 1.46E-25 −5.52 4.12E-59 −5.67
 comp84807_c0 SAUR family protein 5.24E-18 −3.91 1.31E-42 −5.54
 comp85286_c0 SAUR family protein 8.63E-17 −3.06 2.49E-40 −4.54
 comp47517_c0 SAUR family protein 1.31E-18 −5.01 1.31E-38 −4.70
CTK signal transduction
 comp321451_c0 cytokinin receptor (CRE1) 4.14E-03 −6.26 2.32E-06 −6.69
 comp79050_c0 type A response regulator (ARR-A) 3.49E-12 −3.32 1.89E-14 −2.44
 comp36292_c0 type A response regulator (ARR-A) 2.68E-59 −4.07 3.28E-169 −4.00
 comp86047_c0 type A response regulator (ARR-A) 3.50E-05 −2.48 1.48E-18 −3.23
 comp107220_c0 type A response regulator (ARR-A) 1.48E-10 −2.11 8.65E-45 −2.47
Gibberellin signal transduction
 comp94395_c0 DELLA protein 2.51E-07 −2.32 1.61E-06 −1.58
 comp34284_c0 F-box protein GID2 3.10E-04 2.06 8.81E-13 2.57
ABA signal transduction
 comp76549_c0 abscisic acid receptor PYR/PYL family 7.87E-12 −1.06 6.93E-271 −4.24
 comp112827_c0 protein phosphatase 2C (PP2C) 1.08E-05 7.17 4.00E-25 8.69
 comp69932_c0 protein phosphatase 2C (PP2C) 2.23E-06 5.36 3.53E-49 7.18
 comp82660_c0 protein phosphatase 2C (PP2C) 2.92E-07 0.89 1.97E-133 2.22
 comp126799_c0 serine/threonine-protein kinase SAPK 2.46E-02 5.98 5.70E-06 6.47
 comp117023_c0 serine/threonine-protein kinase SAPK 7.22E-02 2.77 2.79E-07 3.23
Eth signal transduction
 comp94418_c0 ethylene receptor (ETR) 1.80E-27 1.83 8.21E-226 2.29
 comp61667_c0 ethylene-responsive transcription factor (ERF) 1.23E-87 4.02 0.00E+ 00 4.18
 comp32358_c0 ethylene-responsive transcription factor (ERF) 7.67E-18 1.82 2.16E-111 2.38
 comp85680_c0 ethylene-responsive transcription factor (ERF) 1.35E-30 2.23 2.85E-147 3.05
 comp74437_c0 ethylene-responsive transcription factor (ERF) 2.23E-02 −1.41 5.41E-18 −3.97
 comp80312_c0 ethylene-responsive transcription factor (ERF) 2.86E-24 −2.68 2.30E-24 −1.66
 comp55944_c0 ethylene-responsive transcription factor (ERF) 3.54E-17 −6.27 4.06E-37 −9.23
 comp191038_c0 ethylene-responsive transcription factor (ERF) 2.04E-07 −2.17 1.32E-16 −3.27
 comp69820_c0 ethylene-responsive transcription factor (ERF) 2.02E-09 −5.35 2.84E-20 − 5.31
 comp33734_c0 ethylene-responsive transcription factor (ERF) 3.87E-14 −2.36 5.33E-95 −5.77
Brassinosteroid signal transduction
 comp119011_c0 brassinosteroid resistant 1/2 2.03E-03 −2.29 1.25E-02 −1.35
SA signal transduction
 comp80158_c0 BZIP transcription factor family protein (TGA) 7.98E-09 −3.61 3.49E-15 −3.34
  1. DEGs with |log2FC| ≥ 2 at least at one stage and FDR ≤ 0.05 were included