Skip to main content

Table 4 List of transcription factors enriched in differentially methylated gene in E. coli 3hpc and E. coli 24hpc

From: DNA methylation analysis of porcine mammary epithelial cells reveals differentially methylated loci associated with immune response against Escherichia coli challenge

E. coli 3 hpc vs Control

 

Genes

Fold enrichment

P-Value

FDR

Transcription factor

 PAX5

62

1.5

8.20E-06

1.40E-03

 USF

62

1.4

3.60E-05

3.10E-03

 HOX13

51

1.6

8.00E-05

4.70E-03

 HMX1

51

1.6

9.00E-05

4.00E-03

 BACH1

54

1.5

1.30E-04

4.70E-03

 AP4

64

1.4

2.20E-04

6.50E-03

 LUN1

53

1.5

2.30E-04

5.90E-03

 MSX1

45

1.5

8.90E-04

1.10E-02

 CREB

46

1.5

9.90E-04

1.00E-02

 IRF2

44

1.5

1.50E-03

1.30E-02

E. coli 24 hpc vs Control

 LMO2COM

102

1.4

2.20E-06

3.90E-04

 OLF1

81

1.5

2.80E-05

2.40E-03

 MYOD

93

1.3

8.10E-05

4.80E-03

 AP4

104

1.3

9.40E-05

4.10E-03

 PAX5

91

1.3

7.00E-04

2.00E-02

 E2F

91

1.3

1.00E-03

2.60E-02

 MSX1

69

1.4

2.00E-03

2.50E-02

 CREB

87

1.3

1.30E-03

2.80E-02

 HEN1

92

1.3

1.50E-03

2.90E-02

 XBP1

77

1.3

7.60E-03

6.50E-02

Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us