Table 1 Common differentially expressed LncRNAs in Ligon-lintless-1 mutant as compared to wild-type during cotton fiber development
LncRNAs ID | log2 (fold change 0 DPA Li1/WT) | Q value | log2 (fold change 8 DPA Li1/WT) | Q value |
|---|---|---|---|---|
LNC_002075 | 2.41 | 5.00E-05 | −1.87 | 0.00045 |
LNC_015258 | 2.49 | 0.0001 | −1.76 | 0.01705 |
LNC_007516 | −1.59 | 0.00015 | 5.54 | 0.0026 |
LNC_015379 | 2.75 | 0.00015 | −2.33 | 0.00035 |
LNC_015166 | 2.46 | 5.00E-05 | −1.57 | 5.00E-05 |
LNC_012210 | −1.88 | 0.00355 | −1.89 | 0.0186 |
LNC_015540 | 3.20 | 0.0059 | −1.96 | 5.00E-05 |
LNC_014831 | 1.52 | 5.00E-05 | −2.12 | 5.00E-05 |
LNC_010975 | 2.93 | 5.00E-05 | −2.17 | 0.00085 |
LNC_001352 | 3.49 | 5.00E-05 | −3.29 | 5.00E-05 |
LNC_008874 | 2.17 | 0.00435 | −1.62 | 0.00395 |
LNC_001734 | 3.81 | 5.00E-05 | −3.08 | 0.00035 |
LNC_001543 | 1.56 | 0.0086 | −1.90 | 0.0042 |
LNC_008391 | 2.97 | 5.00E-05 | −2.52 | 5.00E-05 |
LNC_008336 | 2.51 | 0.00105 | 3.27 | 0.00485 |
LNC_008289 | 1.75 | 0.00025 | −1.88 | 0.0005 |
LNC_008291 | 1.76 | 5.00E-05 | −1.85 | 5.00E-05 |
LNC_006271 | 1.98 | 0.00025 | −1.61 | 0.00045 |
LNC_017132 | 1.60 | 0.0154 | inf | 0.00305 |
LNC_017608 | −1.84 | 0.0001 | 2.56 | 5.00E-05 |
LNC_005974 | 1.53 | 0.00385 | −2.52 | 0.0001 |
LNC_003053 | 1.84 | 5.00E-05 | −1.84 | 5.00E-05 |