Table 1 Gene Ontology (GO) categories enriched in the set of genes commonly up-regulated (Direction of expression: up) or down-regulated (Direction of expression: down) between DS1 and DS5 in all four species studied
Direction of expression | GO category | term | ontology | BH adj. p-value |
|---|---|---|---|---|
up | GO:0055114 | oxidation-reduction process | BP | 2.1e-09 |
GO:0016491 | oxidoreductase activity | MF | 1.8e-08 | |
GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | MF | 0.0039 | |
GO:0006633 | fatty acid biosynthetic process | BP | 0.0236 | |
GO:0055085 | transmembrane transport | BP | 0.0236 | |
down | GO:0005840 | ribosome | CC | 7.6e-58 |
GO:0003735 | structural constituent of ribosome | MF | 7.7e-57 | |
GO:0006412 | translation | BP | 3.5e-56 | |
GO:0005622 | intracellular | CC | 5.3e-32 | |
GO:0005634 | nucleus | CC | 1.7e-14 | |
GO:0003677 | DNA binding | MF | 1.7e-14 | |
GO:0008017 | microtubule binding | MF | 5.6e-11 | |
GO:0000786 | nucleosome | CC | 2.3e-10 | |
GO:0005871 | kinesin complex | CC | 4.1e-09 | |
GO:0006260 | DNA replication | BP | 6.7e-09 | |
GO:0003777 | microtubule motor activity | MF | 7.2-09 | |
GO:0007018 | microtubule-based movement | BP | 7.2e-09 | |
GO:0032502 | developmental process | BP | 2.0e-07 | |
GO:0004518 | nuclease activity | MF | 0.0010 | |
GO:0007076 | mitotic chromosome condensation | BP | 0.0019 | |
GO:0006351 | transcription, DNA-templated | BP | 0.0049 | |
GO:0030915 | Smc5-Smc6 complex | CC | 0.0054 | |
GO:0006355 | regulation of transcription, DNA-templated | BP | 0.0112 | |
GO:0006303 | double-strand break repair via nonhomologous end joining | BP | 0.0160 | |
GO:0015934 | large ribosomal subunit | CC | 0.0212 |