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Table 1 Gene Ontology (GO) categories enriched in the set of genes commonly up-regulated (Direction of expression: up) or down-regulated (Direction of expression: down) between DS1 and DS5 in all four species studied

From: Comparative transcriptomics of early petal development across four diverse species of Aquilegia reveal few genes consistently associated with nectar spur development

Direction of expression GO category term ontology BH adj. p-value
up GO:0055114 oxidation-reduction process BP 2.1e-09
  GO:0016491 oxidoreductase activity MF 1.8e-08
  GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups MF 0.0039
  GO:0006633 fatty acid biosynthetic process BP 0.0236
  GO:0055085 transmembrane transport BP 0.0236
down GO:0005840 ribosome CC 7.6e-58
  GO:0003735 structural constituent of ribosome MF 7.7e-57
  GO:0006412 translation BP 3.5e-56
  GO:0005622 intracellular CC 5.3e-32
  GO:0005634 nucleus CC 1.7e-14
  GO:0003677 DNA binding MF 1.7e-14
  GO:0008017 microtubule binding MF 5.6e-11
  GO:0000786 nucleosome CC 2.3e-10
  GO:0005871 kinesin complex CC 4.1e-09
  GO:0006260 DNA replication BP 6.7e-09
  GO:0003777 microtubule motor activity MF 7.2-09
  GO:0007018 microtubule-based movement BP 7.2e-09
  GO:0032502 developmental process BP 2.0e-07
  GO:0004518 nuclease activity MF 0.0010
  GO:0007076 mitotic chromosome condensation BP 0.0019
  GO:0006351 transcription, DNA-templated BP 0.0049
  GO:0030915 Smc5-Smc6 complex CC 0.0054
  GO:0006355 regulation of transcription, DNA-templated BP 0.0112
  GO:0006303 double-strand break repair via nonhomologous end joining BP 0.0160
  GO:0015934 large ribosomal subunit CC 0.0212
  1. Ontology category abbreviations: BP = biological process, MF = molecular function, CC = cellular component. A GO category was deemed enriched relative to all annotated genes in the Aquilegia reference transcriptome if the p-value adjusted for multiple comparisons using the Benjamini-Hochberg (BH) method was less than 0.05