Skip to main content

Table 2 Salmonella and Escherichia strains in this study. The nomenclature (genus, species, serovar and strain), accession and number of TFTR sequences are listed for all strains of Salmonella and Escherichia in this study

From: TetR-family transcription factors in Gram-negative bacteria: conservation, variation and implications for efflux-mediated antimicrobial resistance

Genus Species/ species and serovar Strain NCBI Tax ID Number of IPR001647 hits
Salmonella enterica serovar Typhimurium DT104 85,569 13
Salmonella enterica serovar Typhimurium STm2 1,218,144 13
Salmonella enterica serovar Typhimurium 4_74 909,946 13
Salmonella enterica serovar Typhimurium 14,028 s 588,858 13
Salmonella enterica serovar Typhimurium SL1344 216,597 13
Salmonella enterica serovar Enteritidis 2009 K0958 1,192,586 12
Salmonella enterica serovar Dublin UC16 1,192,688 12
Salmonella enterica serovar Paratyphi RKS4594 476,213 12
Salmonella enterica serovar Arizonae CVMN6509 1,395,108 12
Salmonella enterica serovar Choleraesuis SC-B67 321,314 14
Salmonella bongori ATCC 43975 54,736 13
Salmonella enterica serovar Muenchen BAA1594 1,079,477 13
Salmonella enterica serovar Infantis CVM N32599PS 1,439,843 13
Salmonella enterica serovar Newport SL254 423,368 13
Salmonella enterica serovar Paratyphi ATCC 9150 295,319 13
Escherichia coli 55,989 585,055 14
Escherichia coli ATCC 9637 566,546 13
Escherichia coli BL21-DE3 469,008 15
Escherichia coli MS 21–1 749,527 15
Escherichia coli SE11 409,438 15
Escherichia coli SMS-3-5 439,855 16
Escherichia coli 3162–1 1,281,200 15
Escherichia coli UTI89 364,106 12
Escherichia coli 1–110-08_S3_C1 1,444,132 14
Escherichia coli MG1655 K-12 511,145 13
Escherichia albertii TW07627 502,347 10
Escherichia albertii B156 550,693 11
Escherichia albertii KF1 1,440,052 10
Escherichia fergusonii ATCC35469 585,054 10
Escherichia fergusonii ECD227 981,367 9