Skip to main content

Advertisement

Table 4 Summary of sex related genes from other species of Class Actynopterigii located in candidate regions in the Salmo salar genome

From: Identification of genomic regions regulating sex determination in Atlantic salmon using high density SNP data

Chrom N genes Region Start (bp) End (bp) Gene Organism
2 20 10 4,378,828 4,378,974 RSPO1 Oryzias latipes
   10 4,384,694 4,384,886 ESR1 Danio rerio
   101 6,070,144 6,070,307 SOX8 Esox lucius
   111 11,563,571 11,564,290 SDY Oncorhynchus mykiss
3 2     
4 1     
5 6     
6 7     
7 1     
9 2     
10 7     
12 1     
13 2     
14 2 661 4,239,034 4,365,414 U2AF2A Danio rerio
15 8     
16 1     
17 2     
18 3     
19 4 83 3,430,459 3,431,574 SOX9 Cynoglossus semilaevis
20 4 87 3,469,065 3,469,779 SDY Oncorhynchus mykiss
21 10 901 453,741 454,610 LMO7 Salvelinus alpinus
   901 1,371,035 1,371,951 SOX21 Poecilia reticulata
   901 1,371,136 1,371,950 SOX21A Danio rerio
   901 1,371,677 1,371,943 SOX1B Danio rerio
   90 1,507,905 1,508,982 SOX1 Poecilia reticulata
22 2     
23 7 98 9,548,635 9,549,406 GNRH-R Oncorhynchus mykiss
24 3     
25 3     
26 1     
27 3     
28 7     
29 1     
  1. Number (N) of sex related genes mapped in this study for each chromosome (Chrom). For those genes located within 1 candidate regions predefined (< 0.5 Mb from the significant SNP) or in the vicinity of candidate regions (< 2.5 Mb from the significant SNP), the specific location of the gene in the S. salar genome and the organism where the gene was identified in NCBI are also detailed