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Table 4 Summary of sex related genes from other species of Class Actynopterigii located in candidate regions in the Salmo salar genome

From: Identification of genomic regions regulating sex determination in Atlantic salmon using high density SNP data

Chrom

N genes

Region

Start (bp)

End (bp)

Gene

Organism

2

20

10

4,378,828

4,378,974

RSPO1

Oryzias latipes

  

10

4,384,694

4,384,886

ESR1

Danio rerio

  

101

6,070,144

6,070,307

SOX8

Esox lucius

  

111

11,563,571

11,564,290

SDY

Oncorhynchus mykiss

3

2

    

4

1

    

5

6

    

6

7

    

7

1

    

9

2

    

10

7

    

12

1

    

13

2

    

14

2

661

4,239,034

4,365,414

U2AF2A

Danio rerio

15

8

    

16

1

    

17

2

    

18

3

    

19

4

83

3,430,459

3,431,574

SOX9

Cynoglossus semilaevis

20

4

87

3,469,065

3,469,779

SDY

Oncorhynchus mykiss

21

10

901

453,741

454,610

LMO7

Salvelinus alpinus

  

901

1,371,035

1,371,951

SOX21

Poecilia reticulata

  

901

1,371,136

1,371,950

SOX21A

Danio rerio

  

901

1,371,677

1,371,943

SOX1B

Danio rerio

  

90

1,507,905

1,508,982

SOX1

Poecilia reticulata

22

2

    

23

7

98

9,548,635

9,549,406

GNRH-R

Oncorhynchus mykiss

24

3

    

25

3

    

26

1

    

27

3

    

28

7

    

29

1

    
  1. Number (N) of sex related genes mapped in this study for each chromosome (Chrom). For those genes located within 1 candidate regions predefined (< 0.5 Mb from the significant SNP) or in the vicinity of candidate regions (< 2.5 Mb from the significant SNP), the specific location of the gene in the S. salar genome and the organism where the gene was identified in NCBI are also detailed