Selection of candidate genes controlling veraison time in grapevine through integration of meta-QTL and transcriptomic data

Table 1 Published grapevine phenology related QTLs included in the analysis

QTL study reference	Trait	QTL Short_Name^a	N° of QTLs included in the study
[52] Ban et al. 2016	ripening	ta, ssc	5
[53] Bayo Canha, PhD thesis 2015	bud break	Sp	6
	flowering	Fw	3
	interval	Vr-Rp	1
	ripening	Tss/Ac, Ac, Ma, Tar/Ma, Rp	11
	veraison	Vr	2
[58] Carreño Ruiz, PhD thesis 2012	bud break	BB	2
	flowering	FT	7
	ripening	RT	4
	veraison	VT	6
[22] Costantini et al. 2008	flowering	FT	4
	interval	F-R, F-V, V-R	6
	ripening	R	1
	veraison	VP, VT	4
[23] Duchêne et al. 2012	bud break	B-B	5
[23] Duchêne et al. 2012	interval	B-F, F-V	17
[25] Fechter et al. 2014	flowering	FBL, FS	27
[25] Fechter et al. 2014	veraison	VT	4
[24] Grzeskowiak et al. 2013	bud break	BB	1
	flowering	FB	3
	veraison	VB, VE	20
[75] Mejía et al. 2007	ripening	RDA	3
[83] Viana et al. 2013	ripening	At, Bpc	9
[86] Zhao et al. 2016	ripening	Cma	5
[85] Zhao et al. 2015	ripening	SSC	2
[26] Zyprian et al. 2016	interval	F-V	8
[26] Zyprian et al. 2016	veraison	VT	18

^aThe original short name of phenology QTLs included in the analysis is indicated. QTLs for veraison are highlighted in bold. QTL short name abbreviations are as following: ta total acid, ssc solubile solids concentration, Sp Sprouting, Fw Flowering, Vr-Rp Veraison-ripening period, Tss/Ac Ratio of total soluble solids to total acidity, Ac Total acidity, Ma Malic acid, Tar/Ma Ratio of tartaric acid to malic acid, Rp Ripening, Vr Veraison, BB Bud break, FT Flowering time, RT Ripening time, VT Veraison time, F-R Flowering ripening interval, F-V Flowering-veraison interval, V-R Veraison ripening interval, R Ripening, VP Veraison period, B-B February–budbreak/Bud, B-F Budbreak–flowering/Flo, FBL Time of full bloom, FS Start of flowering, FB Flowering beginning, VB Veraison beginning, VE Veraison end, RDA Ripening date, At Tartaric acid, Bpc Brix per cluster, Cma Fruit maturation period. Further details about phenotype scoring for each QTL can be found in the Additional file 2, Additional file 19 or in the indicated original publications.

ISSN: 1471-2164