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Table 4 The top 10 up-regulated and down-regulated genes in gene expression analysis

From: PacBio single-molecule long-read sequencing shed new light on the complexity of the Carex breviculmis transcriptome

ID log2FC FDR Regulated Swissprot annotation
F01.PB17844 13.20 9.34E-73 up Isocitrate lyase
F01.PB19517 11.96 3.66E-06 up ATP-dependent zinc metalloprotease FTSH 1, chloroplastic
F01.PB19655 11.76 1.37E-04 up Malate synthase
F01.PB9089 11.67 3.06E-91 up Malate synthase
F01.PB55857 11.25 6.22E-07 up Saccharopine dehydrogenase
F01.PB1057 10.97 6.88E-12 up BTB/POZ and TAZ domain-containing protein 1
F01.PB57591 10.91 1.51E-3 up Cyclin-dependent kinase F-4
F01.PB14534 10.59 3.21E-09 up Hsp70-Hsp90 organizing protein 3
F01.PB15763 10.53 1.24E-10 up ATP-dependent zinc metalloprotease FTSH 12, chloroplastic
F01.PB666 10.41 6.61E-79 up Asparagine synthetase
F01.PB21933 −12.07 5.82E-94 down 3′-N-debenzoyl-2-deoxytaxol-N-benzoy ltransferase
F01.PB30266 −11.20 2.64E-41 down Wall-associated receptor kinase 2
F01.PB58435 −10.55 2.03E-30 down Receptor-like serine/threonine-protein kinase SD1–8
F01.PB54131 −9.90 2.73E-12 down Protein translocase subunit SECA1, chloroplastic
F01.PB43948 −9.30 4.30E-26 down Cinnamoyl-CoA reductase 1
F01.PB4894 −9.23 9.40E-53 down High-affinity nitrate transporter 2.3
F01.PB1704 −9.21 1.39E-15 down Bidirectional sugar transporter SWEET4
F01.PB3797 −9.16 7.70E-11 down uncharacterized protein
F01.PB10550 −9.05 3.29E-23 down Anthocyanidin 5,3-O-glucosyltransferase
F01.PB52691 −8.87 3.76E-33 down Wall-associated receptor kinase 2