Table 1 Reads count in the process of filtration and alignment
From: Characterization of genome-wide variations induced by gamma-ray radiation in barley using RNA-Seq
Sample (replicate) | Raw Reads | Clean Reads | Uniquely Mapped Reads | |||
|---|---|---|---|---|---|---|
(n) | (bp) | (n) | (%) | (n) | (%) | |
Vla-WT (1) | 54,869,632 | 90 | 51,817,980 | 94 | 46,118,002 | 89 |
Vla-WT (2) | 55,107,192 | 90 | 52,013,200 | 94 | 46,291,748 | 89 |
Vla-MT (1) | 54,344,828 | 90 | 51,385,788 | 94 | 45,733,351 | 89 |
Vla-MT (2) | 54,698,866 | 90 | 51,755,362 | 94 | 46,062,272 | 89 |
Total | 219,020,518 | 90 | 206,972,330 | – | 184,205,373 | – |