Chr_Mb | MAF | -log10 P-value | Supporting SNPs | Positional Candidate Genes | Lead SNP Location | Scientific Precedence [reference]; organism; trait |
---|---|---|---|---|---|---|
6_39a | 0.289 | 18.32 | 107 | NCAPG | Exonb | [18, 21, 30, 35,36,37,38,39]; Cattle, chicken; stature, calving ease and growth traits association, SimAngus mid-test metabolic weight association, fetal growth, carcass trait association, average daily gain and daily feed intake, muscle mass |
14_25a | 0.398 | 10.69 | 2 | PLAG1 | 3’UTR | [2, 14, 18, 21, 30, 32,33,34]; Cattle; SimAngus mid-test metabolic weight association, carcass weight, stature, body weight and milk |
5_60a | 0.046 | 8.83 | 2 | LOC527216, LOC788998 | Intergenic | NA |
6_36a | 0.214 | 7.95 | 29 | CCSER1 | Intron | [14, 60]; Cattle, human; body and carcass weight association, regulator of mitosis |
14_26a | 0.415 | 7.90 | 11 | IMPAD1, FAM110B | Intergenic | [30, 32, 34, 40]; Cattle; SimAngus mid-test metabolic weight association, carcass weight association, stature and body weight association, bone and cartilage system |
6_42a | 0.340 | 7.77 | 3 | KCNIP4 | Intron | [39, 41, 42]; Chicken, cattle, human; growth and muscle mass trait association, potassium channel activity |
6_38a | 0.220 | 7.70 | 9 | HERC6, PPM1K | Intergenic | [49, 58, 59]; Cattle; milk, fat, and protein yield, metabolic processes, feed efficiency association |
6_41a | 0.238 | 6.46 | 4 | LOC782905, SLIT2 | Intergenic | [39, 49,50,51,52,53]; Cattle, chicken, human; milk fat and protein association, organ and muscle weight, development of central nervous system, tumor suppressor activity |
6_37a | 0.325 | 5.97 | 5 | SNCA, GPRIN3 | Intergenic | [61,62,63,64]; Human, goat, equine; neurological regulation, milk and meat associations, tendon tissue association |
6_34a | 0.295 | 5.36 | 4 | LOC100336621, LOC104972717 | Intergenic | NA |