Table 3 Pathway enrichment of the genes at the unique node connections of the six main clades
clade | pathway | p-value | genes number |
|---|---|---|---|
A | sag01100: Metabolic pathways | 5.2E-06 | 197 |
sag01110: Biosynthesis of secondary metabolites | 0.0053 | 81 | |
sag00230: Purine metabolism | 0.013 | 43 | |
sag00564: Glycerophospholipid metabolism | 0.028 | 12 | |
sag00550: Peptidoglycan biosynthesis | 0.031 | 22 | |
sag00561: Glycerolipid metabolism | 0.045 | 13 | |
sag00680: Methane metabolism | 0.045 | 14 | |
B | sag01100: Metabolic pathways | 0.0014 | 200 |
sag01110: Biosynthesis of secondary metabolites | 0.0073 | 89 | |
sag00564: Glycerophospholipid metabolism | 0.0074 | 18 | |
sag03060: Protein export | 0.015 | 18 | |
sag00052: Galactose metabolism | 0.016 | 31 | |
C | sag01100: Metabolic pathways | 0.0014 | 48 |
sag01110: Biosynthesis of secondary metabolites | 0.0073 | 17 | |
sag00564: Glycerophospholipid metabolism | 0.0074 | 1 | |
sag03060: Protein export | 0.015 | 7 | |
sag00052: Galactose metabolism | 0.016 | 5 | |
D | sag01100: Metabolic pathways | 0.067 | 44 |
E | sag01100: Metabolic pathways | 0.015 | 50 |
F | sag01100: Metabolic pathways | 0.021 | 13 |