Table 1 List of spacer sequences of Xanthomonas citri pv. citri identified in the present study and homologous sequences in other organisms
Name | Sequence (5′ → 3′) | Bacteriophage-related homologs |
|---|---|---|
Xcc_37 * | aggtatggattgcccgccatagggcggatgttgtcg | (Phage from Xanthomonas) |
Xcc_36 * | tcgctaatcgccaaattgctggagattggccgcgg | Phage from Xanthomonas |
Xcc_35 * | accatcgaagccgagtacaatggcatgtacgtggag | Phages from Xanthomonas and Xylella |
Xcc_34 * | ctcatgtactcaaccgtaaactcacgcacgacacg | [Phage from Xanthomonas] |
Xcc_33 * | accaacgcactggcccgccgagctgacatccacag | Phage from Xanthomonas |
Xcc_32 * | atctgcttgtctagttccaaaatcgccttaaccgg | [Phage from Xanthomonas] |
Xcc_31 * | atcgacggcggcggcatggtgtgggactgccagctg | Phages from Xanthomonas and Xylella, prophage in Ralstonia; (Phages from Burkholderia, Ralstonia and Xylella) |
Xcc_30 * | atcgccagcaagcccatgagcaagggcggctgcgg | Phages from Xanthomonas |
Xcc_29 * | ctcatcaccaccctggagaacgcagcggaaagatgg | No |
Xcc_28 * | gagttcgagggcaagaagaagacgcaggatgaaggg | Phages from Xanthomonas; (Phages from Caulobacter and Xylella) |
Xcc_27 * | ttgcgtataccatccggcccgaacttctccgagg | Phages from Xanthomonas; (Phage from Xanthomonas) |
Xcc_26 * | tattaggagacaatatgaatactgcacctaacatg | No |
Xcc_25 * | tgtagattcggcgaattggatgacaggcgaccgg | Phage from Xanthomonas |
Xcc_24 * | tcttaagagaagctcggatcgtggtttcaaggtcg | No |
Xcc_23 | aaatgctttcgacgcgcataaagcgctggcgcaggag | No |
Xcc_22 | ctgttcaagctccgccgcctgatccgcttgccgag | Filamentous phage in X. citri pv. vignicola |
Xcc_21 | ctcgggtttcgggatgtgcttcagatctgcgtcg | No |
Xcc_20 | cgctgcacggatgcgccaggcggcgaggcgatcat | Prophage in X. citri pv. vignicola |
Xcc_19 | tcgagcgcatcgatgacggtcacccatcccccaatg | No |
Xcc_18 | gtgccaccgacagcgacgcacgtggacctgcagatc | No |
Xcc_17 | ctctctcacgccgcgcgtgcgagatcctgcgtgc | No |
Xcc_16 | gcagactgccgaggccggcatgctggaggggcgcct | Prophage in X. citri pv. phaseoli |
Xcc_15 | gggttaacaacgccttgaaacggctttgccgcgacgc | No |
Xcc_14 | acgtcttggacctgggtgtggttgctgagatagtca | No |
Xcc_13 | gccatcatgctttgaatgcgcttacccacggcgaa | No |
Xcc_12 | gcggatatgtgattagacccttttacgactttcag | No |
Xcc_11 | atgtcgaaaacgatggccttgacgtcatcgtctgc | (Phage from Achromobacter); [Phage from Streptomyces] |
Xcc_10 | ttcgctggcatcggtggatggagccttgcgcttc | (Uncultured Mediterranean bacteriophage) |
Xcc_9 | tcattgaacccaaggaccacttcgcagggcgact | No |
Xcc_8 | ttgaccacatgttctctctgtgggaggaaggcac | No |
Xcc_7 | tgtcgagcgcgcactgctgccgcgatggccggaa | No |
Xcc_6 | ggctgggagcgttacaagtttgagcagcccgtag | No |
Xcc_5 | tggttcagggctggaaagacttggatgcccgcatc | No |
Xcc_4 | ctgactatccctgcataggccacgacctgcgagg | No |
Xcc_3 | aagaagaccagtctgcggcgtcgcggcatcctgggg | No |
Xcc_2 | ctgagttcgtcgccgtcccggtcgtctgacgcgt | [Phage from Microbacterium] |
Xcc_1 | catgccatatgcggcgagatcgcacagcagaaggaa | Prophage in X. citri pv. vignicola |