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Table 4 List of oligonucleotides

From: CRISPR elements provide a new framework for the genealogy of the citrus canker pathogen Xanthomonas citri pv. citri

Name

Sequence (5′ → 3′)

Purpose

Cas1_fw

GCGCGCGGCTGGCGCGA

Detection of cas1 gene

Cas1_rev

CGGCGATTGCGTCCGCC

Leader_fw

TCACGGGGTCCGCATGAC

PCR amplification of CRISPR array

Terminator_rev

CTCGTCAGCGTCCGGCTG

Spacer#19_fw

CGAGCGCATCGATGACGG

PCR amplification of internal region of the CRISPR array

Spacer#21_fw

TCGGGTTTCGGGATGTGC

Spacer#02_rev

CCGGGACGGCGACGAAC

Spacer#18_rev

CGTCGCTGTCGGTGGCAC

IS-1_rev

ACCAGCGCCAGCAGCGG

PCR amplification of internal region of the CRISPR array next to an IS element

IS-2_fw

GCCGACCTGATGATGCA