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Table 3 Consensus: accepting guides selected by at least n tools (except those models trained on the test data and poor performing tools)

From: Improving CRISPR guide design with consensus approaches

 

Wang

 

Doench

Consensus level n

Accepted

Precision

Recall

NPV

Accepted

Precision

Recall

NPV

1

953

0.681

0.888

0.620

1662

0.209

0.935

0.866

2

607

0.763

0.633

0.523

1214

0.236

0.771

0.864

3

284

0.870

0.338

0.453

642

0.280

0.485

0.841

4

102

0.912

0.127

0.402

207

0.324

0.181

0.814

5

30

0.900

0.037

0.382

39

0.333

0.035

0.801

6

3

1.000

0.004

0.376

3

0.333

0.003

0.799

  1. Tools considered here: Cas-Designer, sgRNAScorer2, CHOPCHOP, CHOPCHOP-MM, PhytoCRISP-Ex and mm10db