From: A novel algorithm for alignment of multiple PPI networks based on simulated annealing
Algorithm | Consistency | D1 | D2 | D3 | D4 | D5 | D6 | D7 | D8 | Average |
---|---|---|---|---|---|---|---|---|---|---|
isoRankN | ME | 1.09 | 1.07 | 1.15 | 1.07 | 1.18 | 1.20 | 1.19 | 1.20 | 1.144 |
MNE | 0.58 | 0.56 | 0.58 | 0.59 | 0.53 | 0.60 | 0.60 | 0.58 | 0.58 | |
NetCoffee | ME | * | * | 0.99 | 0.85 | 1.05 | 1.00 | 1.07 | 1.17 | 1.022 |
MNE | * | * | 0.54 | 0.54 | 0.53 | 0.55 | 0.58 | 0.57 | 0.55 | |
multiMAGNA++ | ME | 0.94 | 0.94 | 0.91 | 0.93 | 0.98 | 1.00 | 1.16 | 1.18 | 1.005 |
MNE | 0.55 | 0.54 | 0.53 | 0.58 | 0.52 | 0.57 | 0.63 | 0.59 | 0.56 | |
NetCoffee2 | ME | 1.04 | 0.73 | 0.94 | 0.87 | 1.04 | 1.05 | 1.01 | 1.10 | 0.973 |
MNE | 0.54 | 0.46 | 0.52 | 0.54 | 0.52 | 0.55 | 0.56 | 0.55 | 0.53 |