Skip to main content

Table 2 Frequently mutated human cancer genes and their mutations in syngeneic models of the same cancer type

From: Comparison of the molecular and cellular phenotypes of common mouse syngeneic models with human tumors

Human Cancer

Human Gene (a)

Human Mutation Frequency

Model

Model Mutation

Model

Model Mutation

BRCA

PIK3CA

32.48

4T1

NA

EMT6

NA

BRCA

TP53

30.65

4T1

p.Glu32fs

EMT6

NA

BRCA

CDH1

11.41

4T1

NA

EMT6

NA

COAD

APC

71.62

CT26

NA

MC38

NA

COAD

TP53

53.6

CT26

NA

MC38

p.Gly242Val

p.Ser258Ile

COAD

KRAS

43.24

CT26

p.Gly12Asp

p.Val8Met

MC38

NA

COAD

FBXW7

17.12

CT26

NA

MC38

NA

COAD

PIK3CA

14.86

CT26

NA

MC38

NA

COAD

SMAD4

11.71

CT26

NA

MC38

p.Gly351Arg

COAD

ATM

11.26

CT26

NA

MC38

NA

SKCM

BRAF

51.23

B16F10

NA

  

SKCM

NRAS

26.7

B16F10

NA

  

SKCM

ROS1

17.98

B16F10

NA

  

SKCM

ERBB4

16.35

B16F10

NA

  

SKCM

TP53

15.26

B16F10

p.Asn128Asp

  

SKCM

KDR

13.35

B16F10

NA

  

SKCM

NF1

12.81

B16F10

NA

  

SKCM

CDKN2A

12.26

B16F10

NA

  

LUSC

TP53

81.46

LLCsr

p.Glu32*

p.Arg334Pro

  

LUSC

PIK3CA

15.17

LLCsr

NA

  

LUSC

CDKN2A

14.04

LLCsr

NA

  

LUSC

NF1

11.8

LLCsr

NA

  

LUSC

ROS1

10.67

LLCsr

NA

  

KIRC

VHL

49.89

RENCA

NA

  
  1. aGenes from TARGET database with at least 10% mutation frequency in TCGA samples
  2. BRCA Breast invasive carcinoma, COAD Colon adenocarcinoma, SKCM Skin cutaneous Melanoma, LUSC Lung squamous cell carcinoma, KIRC Kidney renal clear cell carcinoma